STRINGSTRING
Trim43b Trim43b D5Ertd577e D5Ertd577e D13Ertd608e D13Ertd608e Gm21762 Gm21762 Pramel6 Pramel6 Rfpl4b Rfpl4b Zfp791 Zfp791 Mbd3l2 Mbd3l2 Trim42 Trim42
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trim43bTripartite motif-containing protein 43B. (445 aa)    
Predicted Functional Partners:
D5Ertd577e
DNA segment, Chr 5, ERATO Doi 577,-expressed.
   
  
 0.708
D13Ertd608e
DNA segment, Chr 13, ERATO Doi 608,-expressed.
      
 0.660
Gm21762
Predicted gene, 21762.
      
 0.660
Pramel6
Preferentially-expressed antigen in melanoma-like 6.
   
 
 0.607
Rfpl4b
Ret finger protein-like 4B.
      
 0.607
Zfp791
Zinc finger protein 791.
   
 
 0.507
Mbd3l2
Methyl-CpG-binding domain protein 3-like 2.
      
 0.454
Trim42
Tripartite motif-containing protein 42; Belongs to the TRIM/RBCC family.
      
 0.419
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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