STRINGSTRING
Tex47 Tex47 LOC102550160 LOC102550160 Iqcf6 Iqcf6 Zfp956 Zfp956 Ggnbp1 Ggnbp1 Nemp1 Nemp1 Tmed6 Tmed6 Cfap44 Cfap44 Zfp804b Zfp804b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tex47Testis-expressed protein 47. (253 aa)    
Predicted Functional Partners:
LOC102550160
IQ domain-containing protein F5-like.
   
  
 0.592
Iqcf6
Similar to IQ motif containing F1 (Predicted).
   
  
 0.582
Zfp956
Similar to Zinc finger protein 398 (Zinc finger DNA binding protein p52/p71).
      
 0.565
Ggnbp1
Gametogenetin-binding protein 1; Induces mitochondrial fragmentation, possibly by promoting DNM1L-dependent fission and may play a role in mitochondrial morphogenesis during spermatogenesis.
      
 0.547
Nemp1
Nuclear envelope integral membrane protein 1.
      
 0.470
Tmed6
Transmembrane emp24 protein transport domain containing 6 (Predicted).
      
 0.467
Cfap44
Cilia and flagella-associated protein 44.
      
 0.410
Zfp804b
Uncharacterized protein.
   
  
 0.406
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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