Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGN86302.1 | AGN87125.1 | H650_14520 | H650_19010 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.993 |
| AGN86302.1 | rplS | H650_14520 | H650_08920 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.993 |
| AGN86302.1 | rplU | H650_14520 | H650_12465 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| AGN86302.1 | rpmF | H650_14520 | H650_24540 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL32 family. | 0.995 |
| AGN86302.1 | rpmI | H650_14520 | H650_04295 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL35 family. | 0.994 |
| AGN86302.1 | rpsF | H650_14520 | H650_17645 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.994 |
| AGN86302.1 | rpsI | H650_14520 | H650_12615 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.993 |
| AGN86302.1 | rpsO | H650_14520 | H650_12310 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.993 |
| AGN86302.1 | rpsP | H650_14520 | H650_08935 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bS16 family. | 0.992 |
| AGN86302.1 | rpsU | H650_14520 | H650_11740 | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bS21 family. | 0.992 |
| AGN87125.1 | AGN86302.1 | H650_19010 | H650_14520 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.993 |
| AGN87125.1 | rplS | H650_19010 | H650_08920 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.991 |
| AGN87125.1 | rplU | H650_19010 | H650_12465 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| AGN87125.1 | rpmF | H650_19010 | H650_24540 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL32 family. | 0.993 |
| AGN87125.1 | rpmI | H650_19010 | H650_04295 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bL35 family. | 0.988 |
| AGN87125.1 | rpsF | H650_19010 | H650_17645 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.992 |
| AGN87125.1 | rpsI | H650_19010 | H650_12615 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.993 |
| AGN87125.1 | rpsO | H650_19010 | H650_12310 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.993 |
| AGN87125.1 | rpsP | H650_19010 | H650_08935 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bS16 family. | 0.993 |
| AGN87125.1 | rpsU | H650_19010 | H650_11740 | 30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial ribosomal protein bS21 family. | 0.993 |
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