Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABM69969.1 | psaA | A9601_06831 | A9601_17281 | Light-harvesting complex protein. | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | 0.962 |
| ABM69969.1 | psaB | A9601_06831 | A9601_17271 | Light-harvesting complex protein. | Photosystem I PsaB protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | 0.961 |
| ABM69969.1 | psaC | A9601_06831 | A9601_18171 | Light-harvesting complex protein. | Photosystem I subunit PsaC; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, [...] | 0.948 |
| ABM69969.1 | psaD | A9601_06831 | A9601_17851 | Light-harvesting complex protein. | Photosystem I protein PsaD. | 0.931 |
| ABM69969.1 | psaE | A9601_06831 | A9601_03551 | Light-harvesting complex protein. | Photosystem I PsaE protein (subunit IV); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.868 |
| ABM69969.1 | psaF | A9601_06831 | A9601_05241 | Light-harvesting complex protein. | Photosystem I PsaF protein (subunit III). | 0.944 |
| ABM69969.1 | psaK | A9601_06831 | A9601_09551 | Light-harvesting complex protein. | Photosystem I PsaK protein (subunit X). | 0.862 |
| ABM69969.1 | psaL | A9601_06831 | A9601_17231 | Light-harvesting complex protein. | Photosystem I PsaL protein (subunit XI). | 0.924 |
| ABM69969.1 | psbA | A9601_06831 | A9601_02441 | Light-harvesting complex protein. | Photosystem II PsbA protein (D1); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | 0.851 |
| ABM70647.1 | psaA | A9601_13631 | A9601_17281 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | 0.962 |
| ABM70647.1 | psaB | A9601_13631 | A9601_17271 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I PsaB protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | 0.962 |
| ABM70647.1 | psaC | A9601_13631 | A9601_18171 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I subunit PsaC; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, [...] | 0.950 |
| ABM70647.1 | psaD | A9601_13631 | A9601_17851 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I protein PsaD. | 0.936 |
| ABM70647.1 | psaE | A9601_13631 | A9601_03551 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I PsaE protein (subunit IV); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.873 |
| ABM70647.1 | psaF | A9601_13631 | A9601_05241 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I PsaF protein (subunit III). | 0.936 |
| ABM70647.1 | psaK | A9601_13631 | A9601_09551 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I PsaK protein (subunit X). | 0.865 |
| ABM70647.1 | psaL | A9601_13631 | A9601_17231 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem I PsaL protein (subunit XI). | 0.916 |
| ABM70647.1 | psbA | A9601_13631 | A9601_02441 | Chlorophyll a/b binding light harvesting protein PcbD. | Photosystem II PsbA protein (D1); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. | 0.840 |
| psaA | ABM69969.1 | A9601_17281 | A9601_06831 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | Light-harvesting complex protein. | 0.962 |
| psaA | ABM70647.1 | A9601_17281 | A9601_13631 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | Chlorophyll a/b binding light harvesting protein PcbD. | 0.962 |
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