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rlmL rlmL Mmc1_1038 Mmc1_1038 Mmc1_1844 Mmc1_1844 rimP rimP argS argS pnp pnp Mmc1_2467 Mmc1_2467 Mmc1_1698 Mmc1_1698 Mmc1_3618 Mmc1_3618 Mmc1_1695 Mmc1_1695 birA birA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rlmL23S rRNA m(2)G-2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. (722 aa)    
Predicted Functional Partners:
Mmc1_1038
PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: hit:NTHI1370 ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
  
 
 0.725
Mmc1_1844
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
    0.673
rimP
Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
    0.617
argS
KEGG: jan:Jann_1507 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase.
  
    0.612
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
    0.612
Mmc1_2467
TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bte:BTH_I1847 exodeoxyribonuclease III.
  
    0.607
Mmc1_1698
PFAM: UspA domain protein; KEGG: afu:AF1612 cationic amino acid transporter (cat-1).
       0.600
Mmc1_3618
23S rRNA m(5)U-1939 methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: eba:ebA771 23S rRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.593
Mmc1_1695
PFAM: protein of unknown function DUF423; KEGG: neu:NE1173 hypothetical protein.
     
 0.590
birA
biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.588
Your Current Organism:
Magnetococcus marinus
NCBI taxonomy Id: 156889
Other names: M. marinus MC-1, Magnetococcus marinus MC-1, Magnetococcus marinus str. MC-1, Magnetococcus marinus strain MC-1, Magnetococcus sp. MC-1
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