node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rmpF | rplL | FTT_1371 | FTT_0143 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.997 |
rmpF | rplS | FTT_1371 | FTT_0153 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
rmpF | rplT | FTT_1371 | FTT_0820 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rmpF | rplU | FTT_1371 | FTT_0772 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Glycerate kinase, pseudogene; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rmpF | rpmI | FTT_1371 | FTT_0819 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Similar to RL35_ECOLI 50S ribosomal protein L35 from Escherichia coli (64 aa). FASTA: opt: 247 Z-score: 385.9 E(): 1.3e-13 Smith-Waterman score: 247; 62.500 identity in 64 aa overlap; Belongs to the bacterial ribosomal protein bL35 family. | 0.997 |
rmpF | rpsF | FTT_1371 | FTT_1062c | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
rmpF | rpsL | FTT_1371 | FTT_0321 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.997 |
rmpF | rpsM | FTT_1371 | FTT_0347 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.997 |
rmpF | rpsO | FTT_1371 | FTT_0698 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
rmpF | rpsP | FTT_1371 | FTT_0150 | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | Similar to AAP96669 (Q7VKG0) 30S ribosomal protein S16 from Haemophilus ducreyi (82 aa). FASTA: opt: 423 Z-score: 598.5 E(): 1.9e-25 Smith-Waterman score: 423; 75.610 identity in 82 aa overlap; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
rplL | rmpF | FTT_0143 | FTT_1371 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Similar to Q9HZN4 50S ribosomal protein L32 from Pseudomonas aeruginosa (59 aa). FASTA: opt: 286 Z-score: 446.7 E(): 4.9e-17 Smith-Waterman score: 286; 71.186 identity in 59 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. | 0.997 |
rplL | rplS | FTT_0143 | FTT_0153 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.998 |
rplL | rplT | FTT_0143 | FTT_0820 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplL | rplU | FTT_0143 | FTT_0772 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Glycerate kinase, pseudogene; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplL | rpmI | FTT_0143 | FTT_0819 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Similar to RL35_ECOLI 50S ribosomal protein L35 from Escherichia coli (64 aa). FASTA: opt: 247 Z-score: 385.9 E(): 1.3e-13 Smith-Waterman score: 247; 62.500 identity in 64 aa overlap; Belongs to the bacterial ribosomal protein bL35 family. | 0.995 |
rplL | rpsF | FTT_0143 | FTT_1062c | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
rplL | rpsL | FTT_0143 | FTT_0321 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.997 |
rplL | rpsM | FTT_0143 | FTT_0347 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.994 |
rplL | rpsO | FTT_0143 | FTT_0698 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.996 |
rplL | rpsP | FTT_0143 | FTT_0150 | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | Similar to AAP96669 (Q7VKG0) 30S ribosomal protein S16 from Haemophilus ducreyi (82 aa). FASTA: opt: 423 Z-score: 598.5 E(): 1.9e-25 Smith-Waterman score: 423; 75.610 identity in 82 aa overlap; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |