STRINGSTRING
cetZ cetZ PF1508 PF1508 PF1506 PF1506 PF1511 PF1511 PF1509 PF1509 PF1510 PF1510 PF1505 PF1505 hisS hisS fusA fusA PF1563 PF1563 rpoA2 rpoA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cetZCell division protein ftsZ homolog; Involved in cell shape control; Belongs to the CetZ family. (366 aa)    
Predicted Functional Partners:
PF1508
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.849
PF1506
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.827
PF1511
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.746
PF1509
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.664
PF1510
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.664
PF1505
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.555
hisS
histidyl-tRNA synthetase; Function Code: 13.1 Translation: Amino acyl tRNA synthetases; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
  
 0.542
fusA
Elongation factor 2 (EF-2); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
 
 
 0.534
PF1563
DNA-directed RNA polymerase subunit a; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  
 0.528
rpoA2
DNA-directed RNA polymerase subunit a; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  
 0.515
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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