node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PF1087 | PF1542 | PF1087 | PF1542 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | 0.904 |
PF1087 | eif5a | PF1087 | PF1264 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | Translation initiation factor eIF-5a; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.721 |
PF1087 | flpA | PF1087 | PF0059 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | Fibrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. | 0.532 |
PF1087 | fusA | PF1087 | PF2012 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | Elongation factor 2 (EF-2); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.890 |
PF1087 | rpl37e | PF1087 | PF1541 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | LSU ribosomal protein L37E; Binds to the 23S rRNA. | 0.688 |
PF1087 | rpoH | PF1087 | PF1565 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | DNA-directed RNA polymerase subunit h; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.427 |
PF1087 | rpoP | PF1087 | PF2009 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.487 |
PF1087 | rps24e | PF1087 | PF0253 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). | 0.713 |
PF1542 | PF1087 | PF1542 | PF1087 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | 0.904 |
PF1542 | eif5a | PF1542 | PF1264 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Translation initiation factor eIF-5a; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.918 |
PF1542 | flpA | PF1542 | PF0059 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Fibrillarin-like pre-rRNA processing protein; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. | 0.856 |
PF1542 | fusA | PF1542 | PF2012 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Elongation factor 2 (EF-2); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.979 |
PF1542 | hel308 | PF1542 | PF0677 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. Unwinds the lagging strand from forked DNA structures in a 3'-5' direction. PCNA, the DNA polymerase sliding clamp subunit, stimulates the helicase activity, and may alter substrate specificity. Unwinds branched DNA (Holliday junctions) in an ATP-dependent fashion; ss- and dsDNA stimulate ATPase to the greatest extent, although it preferentially binds DNA with a single-stranded region. Processes a RecA-mediated recombination intermediate between gapped circular and homolog [...] | 0.933 |
PF1542 | rpl37e | PF1542 | PF1541 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | LSU ribosomal protein L37E; Binds to the 23S rRNA. | 0.986 |
PF1542 | rpoH | PF1542 | PF1565 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | DNA-directed RNA polymerase subunit h; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.819 |
PF1542 | rpoN | PF1542 | PF1643 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | DNA-directed RNA polymerase subunit n; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.854 |
PF1542 | rpoP | PF1542 | PF2009 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.829 |
PF1542 | rps24e | PF1542 | PF0253 | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). | 0.821 |
eif5a | PF1087 | PF1264 | PF1087 | Translation initiation factor eIF-5a; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical; Belongs to the PDCD5 family. | 0.721 |
eif5a | PF1542 | PF1264 | PF1542 | Translation initiation factor eIF-5a; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | Small nuclear ribonucleoprotein, putative; Function Code: 12.3 Transcription: RNA processing; Belongs to the snRNP Sm proteins family. | 0.918 |