STRINGSTRING
CC_2620 CC_2620 CC_2606 CC_2606 CC_2605 CC_2605 CC_2618 CC_2618 CC_2607 CC_2607 CC_2621 CC_2621 CC_2616 CC_2616 CC_2617 CC_2617 CC_2603 CC_2603 msrQ msrQ CC_2622 CC_2622
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CC_2620Conserved hypothetical protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU); Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (115 aa)    
Predicted Functional Partners:
CC_2606
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
 0.998
CC_2605
Conserved hypothetical protein; Identified by Glimmer2; putative.
 
    0.840
CC_2618
Xanthine dehydrogenase, C-terminal subunit; Identified by match to PFAM protein family HMM PF01315.
 
  
 0.807
CC_2607
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.806
CC_2621
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CC_2616
Chlorohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.770
CC_2617
Chaperone XdhC, putative; Identified by match to protein family HMM.
 
     0.724
CC_2603
N-carbamyl-L-amino acid amidohydrolase; Identified by match to protein family HMM.
 
  
 0.651
msrQ
Conserved hypothetical protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, [...]
   
    0.628
CC_2622
NADP-dependent malic enzyme; Identified by match to PFAM protein family HMM PF01515.
     
 0.592
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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