node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CC_1693 | CC_1823 | CC_1693 | CC_1823 | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | 0.995 |
CC_1693 | HolA | CC_1693 | CC_3751 | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.988 |
CC_1693 | dnaE2 | CC_1693 | CC_3211 | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | DNA polymerase III, alpha subunit, putative; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). Along with ImuA and ImuB is required for the error-prone processing of DNA lesions (By similarity). | 0.801 |
CC_1693 | dnaN | CC_1693 | CC_0156 | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.978 |
CC_1693 | dnaX | CC_1693 | CC_0267 | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.994 |
CC_1693 | ssb | CC_1693 | CC_1468 | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.942 |
CC_1823 | CC_1693 | CC_1823 | CC_1693 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | 0.995 |
CC_1823 | HolA | CC_1823 | CC_3751 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | Hypothetical protein; Identified by Glimmer2; putative. | 0.997 |
CC_1823 | dinB | CC_1823 | CC_2466 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.666 |
CC_1823 | dnaE2 | CC_1823 | CC_3211 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | DNA polymerase III, alpha subunit, putative; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). Along with ImuA and ImuB is required for the error-prone processing of DNA lesions (By similarity). | 0.845 |
CC_1823 | dnaN | CC_1823 | CC_0156 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
CC_1823 | dnaX | CC_1823 | CC_0267 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.996 |
CC_1823 | imuB | CC_1823 | CC_3212 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | Hypothetical protein; Along with DnaE2 and ImuA is required for the error-prone processing of DNA lesions. | 0.689 |
CC_1823 | recA | CC_1823 | CC_1087 | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.739 |
HolA | CC_1693 | CC_3751 | CC_1693 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, chi subunit, putative; Similar to SP:P28905 SP:P11649 GB:L04574 GB:X15130 GB:Z14155; identified by sequence similarity; putative. | 0.988 |
HolA | CC_1823 | CC_3751 | CC_1823 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | 0.997 |
HolA | dnaE2 | CC_3751 | CC_3211 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, alpha subunit, putative; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). Along with ImuA and ImuB is required for the error-prone processing of DNA lesions (By similarity). | 0.826 |
HolA | dnaN | CC_3751 | CC_0156 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
HolA | dnaX | CC_3751 | CC_0267 | Hypothetical protein; Identified by Glimmer2; putative. | DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.998 |
dinB | CC_1823 | CC_2466 | CC_1823 | DNA-damage-inducible protein P; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | DNA polymerase III, delta prime subunit; Identified by match to protein family HMM. | 0.666 |