Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl2142 | ansA | cg2350 | cg2352 | Conserved hypothetical protein. | L-ASPARAGINASE. | 0.560 |
ansA | Cgl2142 | cg2352 | cg2350 | L-ASPARAGINASE. | Conserved hypothetical protein. | 0.560 |
ansA | argG | cg2352 | cg1586 | L-ASPARAGINASE. | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.907 |
ansA | aspA | cg2352 | cg1697 | L-ASPARAGINASE. | ASPARTATE AMMONIA-LYASE (ASPARTASE). | 0.961 |
ansA | cg2353 | cg2352 | cg2353 | L-ASPARAGINASE. | Hypothetical protein disrupted by insertion of ISCg2e. | 0.694 |
ansA | glsK | cg2352 | cg2728 | L-ASPARAGINASE. | PUTATIVE GLUTAMINASE; Belongs to the glutaminase family. | 0.690 |
ansA | ltsA | cg2352 | cg2410 | L-ASPARAGINASE. | Asparagine synthase (Glutamine-hydrolyzing) or lysozyme insensitivity protein LtsA; Glutamine-dependent amidotransferase involved in formation of cell wall and L-glutamate biosynthesis. | 0.915 |
ansA | lysC | cg2352 | cg0306 | L-ASPARAGINASE. | ASPARTOKINASE LYSC ALPHA and beta SUBUNITs; Catalyzes the phosphorylation of the beta-carboxyl group of aspartic acid with ATP to yield 4-phospho-L-aspartate, which is involved in the branched biosynthetic pathway leading to the biosynthesis of amino acids lysine, threonine, isoleucine and methionine; Belongs to the aspartokinase family. | 0.808 |
ansA | panD | cg2352 | cg0172 | L-ASPARAGINASE. | ASPARTATE 1-DECARBOXYLASE; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.841 |
ansA | purA | cg2352 | cg3063 | L-ASPARAGINASE. | ADENYLOSUCCINATE SYNTHETASE; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
ansA | pyrB | cg2352 | cg1816 | L-ASPARAGINASE. | ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.900 |
argG | ansA | cg1586 | cg2352 | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | L-ASPARAGINASE. | 0.907 |
argG | aspA | cg1586 | cg1697 | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | ASPARTATE AMMONIA-LYASE (ASPARTASE). | 0.817 |
argG | ltsA | cg1586 | cg2410 | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Asparagine synthase (Glutamine-hydrolyzing) or lysozyme insensitivity protein LtsA; Glutamine-dependent amidotransferase involved in formation of cell wall and L-glutamate biosynthesis. | 0.926 |
argG | lysC | cg1586 | cg0306 | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | ASPARTOKINASE LYSC ALPHA and beta SUBUNITs; Catalyzes the phosphorylation of the beta-carboxyl group of aspartic acid with ATP to yield 4-phospho-L-aspartate, which is involved in the branched biosynthetic pathway leading to the biosynthesis of amino acids lysine, threonine, isoleucine and methionine; Belongs to the aspartokinase family. | 0.855 |
argG | panD | cg1586 | cg0172 | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | ASPARTATE 1-DECARBOXYLASE; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.800 |
argG | purA | cg1586 | cg3063 | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | ADENYLOSUCCINATE SYNTHETASE; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.924 |
argG | pyrB | cg1586 | cg1816 | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.903 |
aspA | ansA | cg1697 | cg2352 | ASPARTATE AMMONIA-LYASE (ASPARTASE). | L-ASPARAGINASE. | 0.961 |
aspA | argG | cg1697 | cg1586 | ASPARTATE AMMONIA-LYASE (ASPARTASE). | ARGININOSUCCINATE SYNTHASE; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.817 |
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