node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cafA | elaC | c4001 | c2812 | Ribonuclease G; Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure (By similarity). | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.617 |
cafA | rnb | c4001 | c1757 | Ribonuclease G; Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure (By similarity). | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.792 |
cafA | rnt | c4001 | c2045 | Ribonuclease G; Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure (By similarity). | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.635 |
cafA | vacB | c4001 | c5263 | Ribonuclease G; Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure (By similarity). | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.834 |
elaA | elaC | c2811 | c2812 | Protein elaA; Escherichia coli K-12 ortholog: b2267; Escherichia coli O157:H7 ortholog: z3527. | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.560 |
elaA | menD | c2811 | c2808 | Protein elaA; Escherichia coli K-12 ortholog: b2267; Escherichia coli O157:H7 ortholog: z3527. | Menaquinone biosynthesis protein menD; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | 0.461 |
elaA | yfbB | c2811 | c2807 | Protein elaA; Escherichia coli K-12 ortholog: b2267; Escherichia coli O157:H7 ortholog: z3527. | Hypothetical protein yfbB; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). | 0.461 |
elaC | cafA | c2812 | c4001 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribonuclease G; Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure (By similarity). | 0.617 |
elaC | elaA | c2812 | c2811 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Protein elaA; Escherichia coli K-12 ortholog: b2267; Escherichia coli O157:H7 ortholog: z3527. | 0.560 |
elaC | menD | c2812 | c2808 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Menaquinone biosynthesis protein menD; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | 0.457 |
elaC | rnb | c2812 | c1757 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.682 |
elaC | rnd | c2812 | c2208 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.802 |
elaC | rne | c2812 | c1353 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.822 |
elaC | rnpA | c2812 | c4628 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.575 |
elaC | rnt | c2812 | c2045 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. | 0.829 |
elaC | vacB | c2812 | c5263 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily. | 0.721 |
elaC | yfbB | c2812 | c2807 | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | Hypothetical protein yfbB; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). | 0.456 |
menD | elaA | c2808 | c2811 | Menaquinone biosynthesis protein menD; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | Protein elaA; Escherichia coli K-12 ortholog: b2267; Escherichia coli O157:H7 ortholog: z3527. | 0.461 |
menD | elaC | c2808 | c2812 | Menaquinone biosynthesis protein menD; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | Protein elaC; Zinc phosphodiesterase, which has both exoribonuclease and endoribonuclease activities. | 0.457 |
menD | yfbB | c2808 | c2807 | Menaquinone biosynthesis protein menD; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | Hypothetical protein yfbB; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). | 0.997 |