STRINGSTRING
OEOE_1166 OEOE_1166 OEOE_1165 OEOE_1165 OEOE_1164 OEOE_1164 alaS alaS OEOE_0997 OEOE_0997 polC polC whiA whiA OEOE_0846 OEOE_0846 mrnC mrnC OEOE_0431 OEOE_0431 OEOE_0493 OEOE_0493
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
OEOE_1166Hypothetical protein; Belongs to the UPF0297 family. (90 aa)    
Predicted Functional Partners:
OEOE_1165
RNase H-like ribonuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
 
    0.931
OEOE_1164
Hypothetical protein; Belongs to the UPF0473 family.
  
  
 0.906
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.790
OEOE_0997
Predicted SAM-dependent methyltransferase.
  
     0.758
polC
DNA polymerase III, alpha subunit (gram-positive type); Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
     0.703
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.701
OEOE_0846
Polysaccharide transport membrane protein.
  
     0.696
mrnC
Ribonuclease III family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
  
     0.682
OEOE_0431
Predicted nucleic-acid-binding protein implicated in transcription termination.
  
   
 0.671
OEOE_0493
Polysaccharide transport membrane protein.
  
     0.651
Your Current Organism:
Oenococcus oeni
NCBI taxonomy Id: 203123
Other names: O. oeni PSU-1, Oenococcus oeni PSU-1, Oenococcus oeni str. PSU-1, Oenococcus oeni strain PSU-1
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