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pgsA pgsA cds cds pgpA pgpA pgpB pgpB pss pss yfhB yfhB ynbB ynbB yfgA yfgA ads ads ynbD ynbD uvrC uvrC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
pgsACDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (182 aa)    
Predicted Functional Partners:
cds
Similar to Escherichia coli phosphatidate cytidylyltransferase cdsA or cds SW:CDSA_ECOLI (P06466) (249 aa) fasta scores: E(): 0, 75.2% id in 246 aa; Belongs to the CDS family.
 
 
 0.981
pgpA
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
 
 
 0.980
pgpB
Similar to Escherichia coli phosphatidylglycerophosphatase B PgpB SW:PGPB_ECOLI (P18201) (254 aa) fasta scores: E(): 0, 57.5% id in 254 aa,and to Haemophilus influenzae phosphatidylglycerophosphatase B PgpB SW:PGPB_HAEIN (P44570) (241 aa) fasta scores: E(): 1.5e-25, 34.7% id in 236 aa.
  
 
 0.971
pss
Similar to Escherichia coli CDP-diacylglycerol--serine O-phosphatidyltransferase PssA or Pss SW:PSS_ECOLI (P23830) (451 aa) fasta scores: E(): 0,74.1% id in 451 aa, and to Haemophilus influenzae CDP-diacylglycerol--serine O-phosphatidyltransferase PssA or Hi0425 SW:PSS_HAEIN (P44704) (455 aa) fasta scores: E(): 0, 50.1% id in 457 aa.
  
 
 0.965
yfhB
Putative membrane protein; Similar to Escherichia coli hypothetical protein YfhB SW:YFHB_ECOLI (P30133) (211 aa) fasta scores: E(): 0,66.5% id in 206 aa, and to Caulobacter crescentus hypothetical protein CicA SW:CICA_CAUCR (O87707) (222 aa) fasta scores: E(): 0.0044, 24.1% id in 199 aa.
  
 
 0.939
ynbB
Similar to Escherichia coli phosphatidate cytidylyltransferase CdsA SW:CDSA_ECOLI (P06466) (249 aa) fasta scores: E(): 1.5e-14, 30.2% id in 245 aa, and to Escherichia coli hypothetical protein YnbB SW:YNBB_ECOLI (P76091) (298 aa) fasta scores: E(): 0, 57.1% id in 296 aa.
  
 
  0.917
yfgA
Putative DNA-binding protein; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis.
  
    0.851
ads
Putative FolD bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.789
ynbD
Putative dual specificity phosphatase; Similar to Escherichia coli hypothetical protein YnbD SW:YNBD_ECOLI (P76093) (430 aa) fasta scores: E(): 0,49.6% id in 415 aa, and to Pseudomonas aeruginosa hypothetical protein PA2539 TR:AAG05927 (EMBL:AE004681) (437 aa) fasta scores: E(): 0, 44.0% id in 432 aa.
  
 0.788
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
  
  
 0.745
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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