Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| crcB | cspE | YPO2596 | YPO2595 | Putative membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Similar to Escherichia coli probable cold shock protein CspE SW:CSPE_ECOLI (P36997) (68 aa) fasta scores: E(): 1e-25, 94.1% id in 68 aa, and to Vibrio cholerae hypothetical protein TR:AAC72388 (EMBL:AF098260) (69 aa) fasta scores: E(): 3.1e-26, 94.2% id in 69 aa. Similar to YPO1746 (84.1% identity in 69 aa overlap), YPO1655 (83.3% identity in 66 aa overlap), YPO3644 (73.6% identity in 72 aa overlap), YPO3643 (72.2% identity in 72 aa overlap),YPO2659 (63.9% identity in 72 aa overlap) and YPO1398 (53.6% identity in 69 aa overlap). | 0.476 |
| crcB | pagP | YPO2596 | YPO1744 | Putative membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | Putative exported protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.442 |
| cspE | crcB | YPO2595 | YPO2596 | Similar to Escherichia coli probable cold shock protein CspE SW:CSPE_ECOLI (P36997) (68 aa) fasta scores: E(): 1e-25, 94.1% id in 68 aa, and to Vibrio cholerae hypothetical protein TR:AAC72388 (EMBL:AF098260) (69 aa) fasta scores: E(): 3.1e-26, 94.2% id in 69 aa. Similar to YPO1746 (84.1% identity in 69 aa overlap), YPO1655 (83.3% identity in 66 aa overlap), YPO3644 (73.6% identity in 72 aa overlap), YPO3643 (72.2% identity in 72 aa overlap),YPO2659 (63.9% identity in 72 aa overlap) and YPO1398 (53.6% identity in 69 aa overlap). | Putative membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.476 |
| pagP | crcB | YPO1744 | YPO2596 | Putative exported protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Putative membrane protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.442 |