STRINGSTRING
yegP yegP YPO2884 YPO2884 YPO1250 YPO1250 YPO1875 YPO1875 YPO1880 YPO1880 YPO2145 YPO2145 psiF psiF YPO1881 YPO1881 YPO1181 YPO1181 YPO2153 YPO2153 YPO2444 YPO2444
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yegPSimilar to Escherichia coli hypothetical protein YegP SW:YEGP_ECOLI (P76402) (110 aa) fasta scores: E(): 3.4e-19, 53.7% id in 108 aa, and to Pseudomonas aeruginosa hypothetical protein PA0329 TR:AAG03718 (EMBL:AE004471) (110 aa) fasta scores: E(): 6.7e-15, 49.5% id in 95 aa; Belongs to the UPF0339 family. Duplicated subfamily. (112 aa)    
Predicted Functional Partners:
YPO2884
Putative exported protein; No significant database matches.
 
   0.984
YPO1250
Similar to Bacteriophage Mu protein gp47 47 SW:VG47_BPMU (Q9T1V2) (360 aa) fasta scores: E(): 8.1e-15,32.2% id in 379 aa, and to Haemophilus influenzae Mu-like prophage FluMu protein gp47 hi1520 SW:VG47_HAEIN (P44240) (355 aa) fasta scores: E(): 2.2e-12, 31.0% id in 384 aa.
  
 
 0.943
YPO1875
Similar to the N-terminal parts of Bacteriophage P2 major tail sheath protein FI SW:VPF1_BPP2 (P22501) (395 aa) fasta scores: E(): 4.2e-12, 76.2% id in 42 aa, and to Salmonella typhi hypothetical 42.1 kDa protein TR:Q9RPM5 (EMBL:AF153829) (390 aa) fasta scores: E(): 6.3e-12, 74.4% id in 39 aa; was marked partial.
   
 
 0.935
YPO1880
Phage-related protein; Similar to Bacteriophage P2 baseplate assembly protein W SW:VPW_BPP2 (P51768) (115 aa) fasta scores: E(): 2.8e-18, 62.2% id in 82 aa, and to Wolbachia sp. wKue Gp25 protein TR:Q9JML7 (EMBL:AB036666) (108 aa) fasta scores: E(): 3.3e-08, 41.1% id in 95 aa.
   
   0.930
YPO2145
Similar to Escherichia coli hypothetical protein YcgB SW:YCGB_ECOLI (P29013) (510 aa) fasta scores: E(): 0,84.6% id in 508 aa, and to Vibrio cholerae hypothetical protein VC1874 vc1874 TR:Q9KQX3 (EMBL:AE004263) (516 aa) fasta scores: E(): 0, 73.5% id in 501 aa.
   
    0.830
psiF
Similar to Escherichia coli phosphate starvation-inducible protein PsiF precursor psiF SW:PSIF_ECOLI (P27295) (106 aa) fasta scores: E(): 1.2e-15,54.5% id in 112 aa.
   
    0.824
YPO1881
Phage-related protein; Similar to the central regions of Bacteriophage P2 baseplate assembly protein V SW:VPV_BPP2 (P31340) (211 aa) fasta scores: E(): 4.6e-14, 55.4% id in 74 aa, and to Wolbachia sp. wKue Gp24 protein TR:Q9JML8 (EMBL:AB036666) (154 aa) fasta scores: E(): 3.1e-10, 45.1% id in 82 aa.
   
   0.771
YPO1181
Putative membrane protein; Similar to Escherichia coli hypothetical 8.7 kDa protein in gapA-rnd intergenic region YeaQ SW:YEAQ_ECOLI (P76246) (82 aa) fasta scores: E(): 1.8e-23, 82.9% id in 82 aa, and to Escherichia coli transglycosylase associated protein SW:TAG1_ECOLI (P76011) (84 aa) fasta scores: E(): 1.7e-16, 63.4% id in 82 aa.
   
  
 0.682
YPO2153
Similar to Escherichia coli hypothetical protein YeaG SW:YEAG_ECOLI (P77391) (644 aa) fasta scores: E(): 0,94.4% id in 644 aa, and to Vibrio cholerae hypothetical protein VC1872 vc1872 TR:Q9KQX5 (EMBL:AE004263) (644 aa) fasta scores: E(): 0, 84.0% id in 644 aa.
   
    0.669
YPO2444
Similar to Escherichia coli hypothetical protein YniA TR:P77739 (EMBL:AE000267) (286 aa) fasta scores: E(): 0, 68.7% id in 284 aa, and to Vibrio cholerae hypothetical protein VC1539 TR:Q9KRU5 (EMBL:AE004232) (288 aa) fasta scores: E(): 0, 48.6% id in 286 aa; Belongs to the fructosamine kinase family.
   
    0.649
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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