Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0572 | gidB | CBU_0572 | CBU_1925 | Cytosol aminopeptidase; Belongs to the peptidase M17 family. | Methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.601 |
CBU_1928 | CBU_1929 | CBU_1928 | CBU_1929 | acyl-CoA synthetase. | Transporter, MFS superfamily. | 0.780 |
CBU_1928 | CBU_1930 | CBU_1928 | CBU_1930 | acyl-CoA synthetase. | Hypothetical protein. | 0.610 |
CBU_1928 | gidA | CBU_1928 | CBU_1924 | acyl-CoA synthetase. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.662 |
CBU_1928 | gidB | CBU_1928 | CBU_1925 | acyl-CoA synthetase. | Methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.765 |
CBU_1928 | parA | CBU_1928 | CBU_1926 | acyl-CoA synthetase. | Chromosome partitioning protein. | 0.768 |
CBU_1928 | parB | CBU_1928 | CBU_1927 | acyl-CoA synthetase. | Chromosome partitioning protein; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity); Belongs to the ParB family. | 0.787 |
CBU_1928 | trmE | CBU_1928 | CBU_1922 | acyl-CoA synthetase. | tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.818 |
CBU_1929 | CBU_1928 | CBU_1929 | CBU_1928 | Transporter, MFS superfamily. | acyl-CoA synthetase. | 0.780 |
CBU_1929 | CBU_1930 | CBU_1929 | CBU_1930 | Transporter, MFS superfamily. | Hypothetical protein. | 0.610 |
CBU_1929 | gidA | CBU_1929 | CBU_1924 | Transporter, MFS superfamily. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.658 |
CBU_1929 | gidB | CBU_1929 | CBU_1925 | Transporter, MFS superfamily. | Methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.762 |
CBU_1929 | parA | CBU_1929 | CBU_1926 | Transporter, MFS superfamily. | Chromosome partitioning protein. | 0.762 |
CBU_1929 | parB | CBU_1929 | CBU_1927 | Transporter, MFS superfamily. | Chromosome partitioning protein; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity); Belongs to the ParB family. | 0.762 |
CBU_1930 | CBU_1928 | CBU_1930 | CBU_1928 | Hypothetical protein. | acyl-CoA synthetase. | 0.610 |
CBU_1930 | CBU_1929 | CBU_1930 | CBU_1929 | Hypothetical protein. | Transporter, MFS superfamily. | 0.610 |
CBU_1930 | gidA | CBU_1930 | CBU_1924 | Hypothetical protein. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.524 |
CBU_1930 | gidB | CBU_1930 | CBU_1925 | Hypothetical protein. | Methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.602 |
CBU_1930 | parA | CBU_1930 | CBU_1926 | Hypothetical protein. | Chromosome partitioning protein. | 0.602 |
CBU_1930 | parB | CBU_1930 | CBU_1927 | Hypothetical protein. | Chromosome partitioning protein; Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity); Belongs to the ParB family. | 0.602 |
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