STRINGSTRING
Acid_6590 Acid_6590 Acid_6592 Acid_6592 Acid_6589 Acid_6589 Acid_6591 Acid_6591 Acid_3246 Acid_3246 Acid_0193 Acid_0193 Acid_1398 Acid_1398 Acid_4289 Acid_4289 Acid_0023 Acid_0023 Acid_5149 Acid_5149 Acid_2627 Acid_2627
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Acid_6590Oxidoreductase domain protein; Glycosidase. (438 aa)    
Predicted Functional Partners:
Acid_6592
Galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: xla:380379 galactokinase 2.
 
 
 0.845
Acid_6589
PFAM: AMP-dependent synthetase and ligase; KEGG: eba:ebA1206 putative acetyl-coenzyme A synthetase.
  
    0.775
Acid_6591
PFAM: Na+/solute symporter; KEGG: rba:RB4564 sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
Acid_3246
PFAM: oxidoreductase domain protein; KEGG: rba:RB2833 conserved hypothetical protein, putative NADH-dependent dyhydrogenase.
  
     0.692
Acid_0193
Exo-alpha-sialidase; KEGG: sma:SAV5606 neuramidase.
 
     0.684
Acid_1398
PFAM: coagulation factor 5/8 type domain protein; KEGG: nar:Saro_2423 twin-arginine translocation pathway signal.
  
     0.658
Acid_4289
PFAM: oxidoreductase domain protein; KEGG: rba:RB11650 probable NADH-dependent deydrogenase.
  
     0.628
Acid_0023
PFAM: oxidoreductase domain protein; KEGG: rba:RB10503 probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase.
  
     0.616
Acid_5149
TIGRFAM: putative alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: bfr:BF0350 alpha-1,2-mannosidase.
  
     0.587
Acid_2627
PFAM: protein of unknown function DUF1080; KEGG: sru:SRU_2533 probable secreted glycosyl hydrolase.
  
     0.586
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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