node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP_0520 | ACP_0521 | ACP_0520 | ACP_0521 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | 0.587 |
ACP_0520 | ACP_0523 | ACP_0520 | ACP_0523 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.400 |
ACP_0521 | ACP_0520 | ACP_0521 | ACP_0520 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Hypothetical protein; Identified by glimmer; putative. | 0.587 |
ACP_0521 | ACP_0523 | ACP_0521 | ACP_0523 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Hypothetical protein; Identified by glimmer; putative. | 0.533 |
ACP_0521 | aspS | ACP_0521 | ACP_2346 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.534 |
ACP_0521 | efp | ACP_0521 | ACP_2876 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.465 |
ACP_0521 | metG | ACP_0521 | ACP_2842 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.516 |
ACP_0521 | rplM | ACP_0521 | ACP_2944 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.478 |
ACP_0521 | rplS | ACP_0521 | ACP_2803 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.471 |
ACP_0521 | rpmF | ACP_0521 | ACP_1926 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family. | 0.501 |
ACP_0521 | tig | ACP_0521 | ACP_3434 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.479 |
ACP_0521 | ychF | ACP_0521 | ACP_2077 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.449 |
ACP_0523 | ACP_0520 | ACP_0523 | ACP_0520 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.400 |
ACP_0523 | ACP_0521 | ACP_0523 | ACP_0521 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | 0.533 |
aspS | ACP_0521 | ACP_2346 | ACP_0521 | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. | 0.534 |
aspS | efp | ACP_2346 | ACP_2876 | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.453 |
aspS | metG | ACP_2346 | ACP_2842 | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.659 |
aspS | rplM | ACP_2346 | ACP_2944 | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.529 |
aspS | rpmF | ACP_2346 | ACP_1926 | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family. | 0.490 |
aspS | tig | ACP_2346 | ACP_3434 | aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.408 |