Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MJ_0279 | MJ_1383 | 4-hydroxybenzoate octaprenyltransferase (ubiA); Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | 0.410 |
MJ_1311 | MJ_1383 | Conserved hypothetical protein; Similar to SP:P42419 PID:709989 GB:AL009126 percent identity: 31.82; identified by sequence similarity; putative; To M.jannaschii MJ1614 and MJ0008. | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | 0.446 |
MJ_1382 | MJ_1383 | Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 70.83; identified by sequence similarity; putative; Belongs to the UPF0310 family. | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | 0.504 |
MJ_1383 | MJ_0279 | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | 4-hydroxybenzoate octaprenyltransferase (ubiA); Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids. | 0.410 |
MJ_1383 | MJ_1311 | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | Conserved hypothetical protein; Similar to SP:P42419 PID:709989 GB:AL009126 percent identity: 31.82; identified by sequence similarity; putative; To M.jannaschii MJ1614 and MJ0008. | 0.446 |
MJ_1383 | MJ_1382 | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 70.83; identified by sequence similarity; putative; Belongs to the UPF0310 family. | 0.504 |
MJ_1383 | MJ_1384 | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | NADH oxidase; Similar to GB:AE000782 percent identity: 43.64; identified by sequence similarity; putative. | 0.876 |
MJ_1383 | MJ_1385 | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | Conserved hypothetical protein; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. | 0.817 |
MJ_1384 | MJ_1383 | NADH oxidase; Similar to GB:AE000782 percent identity: 43.64; identified by sequence similarity; putative. | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | 0.876 |
MJ_1384 | MJ_1385 | NADH oxidase; Similar to GB:AE000782 percent identity: 43.64; identified by sequence similarity; putative. | Conserved hypothetical protein; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. | 0.762 |
MJ_1385 | MJ_1383 | Conserved hypothetical protein; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. | Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.44; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. | 0.817 |
MJ_1385 | MJ_1384 | Conserved hypothetical protein; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. | NADH oxidase; Similar to GB:AE000782 percent identity: 43.64; identified by sequence similarity; putative. | 0.762 |