node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TDE_0882 | rimM | TDE_0882 | TDE_0883 | Conserved hypothetical protein; Identified by similarity to SP:O83876; Belongs to the UPF0109 family. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.961 |
TDE_0882 | rplS | TDE_0882 | TDE_0885 | Conserved hypothetical protein; Identified by similarity to SP:O83876; Belongs to the UPF0109 family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.981 |
TDE_0882 | rpsP | TDE_0882 | TDE_0881 | Conserved hypothetical protein; Identified by similarity to SP:O83876; Belongs to the UPF0109 family. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.975 |
TDE_0882 | rpsR | TDE_0882 | TDE_1676 | Conserved hypothetical protein; Identified by similarity to SP:O83876; Belongs to the UPF0109 family. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.839 |
TDE_0882 | trmD | TDE_0882 | TDE_0884 | Conserved hypothetical protein; Identified by similarity to SP:O83876; Belongs to the UPF0109 family. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.870 |
cmk-2 | guaA | TDE_2080 | TDE_1718 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.886 |
cmk-2 | rimM | TDE_2080 | TDE_0883 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.939 |
cmk-2 | rplS | TDE_2080 | TDE_0885 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.986 |
cmk-2 | rpsB | TDE_2080 | TDE_2347 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.985 |
cmk-2 | rpsP | TDE_2080 | TDE_0881 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.978 |
cmk-2 | rpsR | TDE_2080 | TDE_1676 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.950 |
cmk-2 | rpsS | TDE_2080 | TDE_0771 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.977 |
cmk-2 | trmD | TDE_2080 | TDE_0884 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.962 |
cmk-2 | tsf | TDE_2080 | TDE_2346 | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.975 |
guaA | cmk-2 | TDE_1718 | TDE_2080 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717. | 0.886 |
guaA | rimM | TDE_1718 | TDE_0883 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.938 |
guaA | rplS | TDE_1718 | TDE_0885 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.874 |
guaA | rpsB | TDE_1718 | TDE_2347 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.818 |
guaA | rpsR | TDE_1718 | TDE_1676 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.623 |
guaA | rpsS | TDE_1718 | TDE_0771 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.834 |