node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TDE_1446 | miaA-2 | TDE_1446 | TDE_1447 | Membrane protein, putative. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.746 |
TDE_1446 | murI | TDE_1446 | TDE_1448 | Membrane protein, putative. | Glutamate racemase, putative; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.662 |
TDE_1446 | mutS2 | TDE_1446 | TDE_1450 | Membrane protein, putative. | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.610 |
TDE_1446 | yjeQ | TDE_1446 | TDE_1449 | Membrane protein, putative. | GTPase YjeQ; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.662 |
TDE_1579 | mutS2 | TDE_1579 | TDE_1450 | Fibronectin/fibrinogen-binding protein, internal deletion; Identified by similarity to GP:19110786; match to protein family HMM PF05670; match to protein family HMM PF05833. | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.674 |
TDE_1579 | rplD | TDE_1579 | TDE_0768 | Fibronectin/fibrinogen-binding protein, internal deletion; Identified by similarity to GP:19110786; match to protein family HMM PF05670; match to protein family HMM PF05833. | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.672 |
miaA-2 | TDE_1446 | TDE_1447 | TDE_1446 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Membrane protein, putative. | 0.746 |
miaA-2 | murI | TDE_1447 | TDE_1448 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Glutamate racemase, putative; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.686 |
miaA-2 | mutS2 | TDE_1447 | TDE_1450 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.697 |
miaA-2 | polA | TDE_1447 | TDE_1637 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.467 |
miaA-2 | yjeQ | TDE_1447 | TDE_1449 | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | GTPase YjeQ; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.693 |
murI | TDE_1446 | TDE_1448 | TDE_1446 | Glutamate racemase, putative; Provides the (R)-glutamate required for cell wall biosynthesis. | Membrane protein, putative. | 0.662 |
murI | miaA-2 | TDE_1448 | TDE_1447 | Glutamate racemase, putative; Provides the (R)-glutamate required for cell wall biosynthesis. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.686 |
murI | mutS2 | TDE_1448 | TDE_1450 | Glutamate racemase, putative; Provides the (R)-glutamate required for cell wall biosynthesis. | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.815 |
murI | yjeQ | TDE_1448 | TDE_1449 | Glutamate racemase, putative; Provides the (R)-glutamate required for cell wall biosynthesis. | GTPase YjeQ; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.779 |
mutS | mutS2 | TDE_2603 | TDE_1450 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.945 |
mutS | polA | TDE_2603 | TDE_1637 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.943 |
mutS2 | TDE_1446 | TDE_1450 | TDE_1446 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | Membrane protein, putative. | 0.610 |
mutS2 | TDE_1579 | TDE_1450 | TDE_1579 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | Fibronectin/fibrinogen-binding protein, internal deletion; Identified by similarity to GP:19110786; match to protein family HMM PF05670; match to protein family HMM PF05833. | 0.674 |
mutS2 | miaA-2 | TDE_1450 | TDE_1447 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.697 |