Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MAP_2255 | MAP_2256 | MAP_2255 | MAP_2256 | Hypothetical protein. | Hypothetical protein; Belongs to the LeuD family. | 0.999 |
MAP_2255 | MAP_2277c | MAP_2255 | MAP_2277c | Hypothetical protein. | Hypothetical protein. | 0.823 |
MAP_2255 | MAP_3027 | MAP_2255 | MAP_3027 | Hypothetical protein. | Hypothetical protein. | 0.445 |
MAP_2255 | MAP_3255 | MAP_2255 | MAP_3255 | Hypothetical protein. | Hypothetical protein; Belongs to the TPP enzyme family. | 0.896 |
MAP_2255 | ilvC | MAP_2255 | MAP_3036c | Hypothetical protein. | IlvC; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.920 |
MAP_2255 | ilvD | MAP_2255 | MAP_3631c | Hypothetical protein. | IlvD; Belongs to the IlvD/Edd family. | 0.897 |
MAP_2255 | leuA | MAP_2255 | MAP_0312 | Hypothetical protein. | LeuA; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.979 |
MAP_2255 | leuB | MAP_2255 | MAP_3032c | Hypothetical protein. | LeuB; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.998 |
MAP_2255 | leuC | MAP_2255 | MAP_3026c | Hypothetical protein. | LeuC; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.908 |
MAP_2255 | leuD | MAP_2255 | MAP_3025c | Hypothetical protein. | LeuD; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.998 |
MAP_2256 | MAP_2255 | MAP_2256 | MAP_2255 | Hypothetical protein; Belongs to the LeuD family. | Hypothetical protein. | 0.999 |
MAP_2256 | MAP_2277c | MAP_2256 | MAP_2277c | Hypothetical protein; Belongs to the LeuD family. | Hypothetical protein. | 0.820 |
MAP_2256 | MAP_3027 | MAP_2256 | MAP_3027 | Hypothetical protein; Belongs to the LeuD family. | Hypothetical protein. | 0.422 |
MAP_2256 | MAP_3255 | MAP_2256 | MAP_3255 | Hypothetical protein; Belongs to the LeuD family. | Hypothetical protein; Belongs to the TPP enzyme family. | 0.881 |
MAP_2256 | ilvC | MAP_2256 | MAP_3036c | Hypothetical protein; Belongs to the LeuD family. | IlvC; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.873 |
MAP_2256 | ilvD | MAP_2256 | MAP_3631c | Hypothetical protein; Belongs to the LeuD family. | IlvD; Belongs to the IlvD/Edd family. | 0.807 |
MAP_2256 | leuA | MAP_2256 | MAP_0312 | Hypothetical protein; Belongs to the LeuD family. | LeuA; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.977 |
MAP_2256 | leuB | MAP_2256 | MAP_3032c | Hypothetical protein; Belongs to the LeuD family. | LeuB; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.984 |
MAP_2256 | leuC | MAP_2256 | MAP_3026c | Hypothetical protein; Belongs to the LeuD family. | LeuC; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.986 |
MAP_2256 | leuD | MAP_2256 | MAP_3025c | Hypothetical protein; Belongs to the LeuD family. | LeuD; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.900 |
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