STRINGSTRING
mtrA mtrA mtrB mtrB senX3 senX3 MAP_0833c MAP_0833c lpqB lpqB MAP_0153 MAP_0153 phoR phoR MAP_1222 MAP_1222 MAP_1101 MAP_1101 MAP_1001c MAP_1001c MAP_0260 MAP_0260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtrAMtrA; Member of the two-component regulatory system MtrA/MtrB. (228 aa)    
Predicted Functional Partners:
mtrB
MtrB; Member of the two-component regulatory system MtrA/MtrB. Seems to function as a membrane-associated protein kinase that phosphorylates MtrA in response to environmental signals (By similarity).
 0.999
senX3
SenX3.
 
 0.960
MAP_0833c
Hypothetical protein.
 
 
 0.939
lpqB
LpqB.
     
 0.925
MAP_0153
Hypothetical protein.
 
 
 0.914
phoR
PhoR.
 
 0.907
MAP_1222
Hypothetical protein.
 
 0.904
MAP_1101
Hypothetical protein.
 
 0.898
MAP_1001c
Hypothetical protein.
 
 0.884
MAP_0260
Hypothetical protein.
 
 0.881
Your Current Organism:
Mycobacterium avium
NCBI taxonomy Id: 262316
Other names: M. avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K-10, Mycobacterium avium subsp. paratuberculosis K10, Mycobacterium avium subsp. paratuberculosis str. K-10, Mycobacterium avium subsp. paratuberculosis strain K-10
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