Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MAP_0299c | deoC | MAP_0299c | MAP_3971 | Hypothetical protein; Belongs to the carbohydrate kinase PfkB family. | DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.930 |
MAP_0299c | rbsK | MAP_0299c | MAP_2251 | Hypothetical protein; Belongs to the carbohydrate kinase PfkB family. | RbsK; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.928 |
MAP_0299c | tkt | MAP_0299c | MAP_1178c | Hypothetical protein; Belongs to the carbohydrate kinase PfkB family. | Tkt; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.937 |
MAP_0299c | tpi | MAP_0299c | MAP_1166 | Hypothetical protein; Belongs to the carbohydrate kinase PfkB family. | Tpi; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.415 |
MAP_1573c | MAP_4308c | MAP_1573c | MAP_4308c | Hypothetical protein. | Hypothetical protein. | 0.909 |
MAP_1573c | deoC | MAP_1573c | MAP_3971 | Hypothetical protein. | DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.901 |
MAP_1573c | tal | MAP_1573c | MAP_1177c | Hypothetical protein. | Tal; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.934 |
MAP_1573c | tkt | MAP_1573c | MAP_1178c | Hypothetical protein. | Tkt; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.921 |
MAP_1573c | tpi | MAP_1573c | MAP_1166 | Hypothetical protein. | Tpi; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.876 |
MAP_3969 | MAP_3970 | MAP_3969 | MAP_3970 | Hypothetical protein. | Hypothetical protein. | 0.875 |
MAP_3969 | deoC | MAP_3969 | MAP_3971 | Hypothetical protein. | DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.875 |
MAP_3970 | MAP_3969 | MAP_3970 | MAP_3969 | Hypothetical protein. | Hypothetical protein. | 0.875 |
MAP_3970 | deoC | MAP_3970 | MAP_3971 | Hypothetical protein. | DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.879 |
MAP_4308c | MAP_1573c | MAP_4308c | MAP_1573c | Hypothetical protein. | Hypothetical protein. | 0.909 |
MAP_4308c | deoC | MAP_4308c | MAP_3971 | Hypothetical protein. | DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.904 |
MAP_4308c | tal | MAP_4308c | MAP_1177c | Hypothetical protein. | Tal; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.943 |
MAP_4308c | tkt | MAP_4308c | MAP_1178c | Hypothetical protein. | Tkt; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.938 |
MAP_4308c | tpi | MAP_4308c | MAP_1166 | Hypothetical protein. | Tpi; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.958 |
deoA | deoC | MAP_3439c | MAP_3971 | DeoA. | DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.951 |
deoC | MAP_0299c | MAP_3971 | MAP_0299c | DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | Hypothetical protein; Belongs to the carbohydrate kinase PfkB family. | 0.930 |
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