Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CF0693 | rnhB2 | gene:10544520 | CF0709 | Conserved hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | 0.430 |
CF0693 | rps21 | gene:10544520 | CF0681 | Conserved hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.864 |
CF0710 | rnhB2 | gene:10544538 | CF0709 | Conserved hypothetical protein. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | 0.592 |
lplA2 | rnhB2 | CF0651 | CF0709 | Lipoate protein ligase A. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | 0.411 |
rnhB2 | CF0693 | CF0709 | gene:10544520 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | Conserved hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.430 |
rnhB2 | CF0710 | CF0709 | gene:10544538 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | Conserved hypothetical protein. | 0.592 |
rnhB2 | lplA2 | CF0709 | CF0651 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | Lipoate protein ligase A. | 0.411 |
rnhB2 | rps21 | CF0709 | CF0681 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.518 |
rnhB2 | yfgA | CF0709 | CF0708 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | Transcription regulator; Containing HTH/2Fe-2S Ferredoxin domains. | 0.584 |
rps21 | CF0693 | CF0681 | gene:10544520 | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Conserved hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.864 |
rps21 | rnhB2 | CF0681 | CF0709 | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | 0.518 |
yfgA | rnhB2 | CF0708 | CF0709 | Transcription regulator; Containing HTH/2Fe-2S Ferredoxin domains. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. RnhC subfamily. | 0.584 |