Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CF0795 | dagA2 | gene:10544623 | CF0798 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | D-alanine/glycine permease. | 0.671 |
CF0795 | dksA | gene:10544623 | CF0796 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | dnaK suppressor. | 0.833 |
CF0795 | kpsF | gene:10544623 | CF0788 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | Sugar-phosphate isomerase-like protein; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.611 |
CF0795 | lspA | gene:10544623 | CF0797 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.756 |
CF0795 | ribC | gene:10544623 | CF0794 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | Riboflavin synthase alpha chain; EC 2.5.1.9. | 0.640 |
CF0795 | rrm10 | gene:10544623 | CF0792 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | tRNA/rRNA methyltransferase; EC 2.1.1.-; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.639 |
CF0795 | rrm11 | gene:10544623 | CF0793 | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | tRNA/rRNA methyltransferase; EC 2.1.1.-. | 0.639 |
dagA2 | CF0795 | CF0798 | gene:10544623 | D-alanine/glycine permease. | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.671 |
dagA2 | dksA | CF0798 | CF0796 | D-alanine/glycine permease. | dnaK suppressor. | 0.719 |
dagA2 | lspA | CF0798 | CF0797 | D-alanine/glycine permease. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.716 |
dagA2 | ribC | CF0798 | CF0794 | D-alanine/glycine permease. | Riboflavin synthase alpha chain; EC 2.5.1.9. | 0.507 |
dagA2 | rrm10 | CF0798 | CF0792 | D-alanine/glycine permease. | tRNA/rRNA methyltransferase; EC 2.1.1.-; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.504 |
dagA2 | rrm11 | CF0798 | CF0793 | D-alanine/glycine permease. | tRNA/rRNA methyltransferase; EC 2.1.1.-. | 0.504 |
dksA | CF0795 | CF0796 | gene:10544623 | dnaK suppressor. | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.833 |
dksA | dagA2 | CF0796 | CF0798 | dnaK suppressor. | D-alanine/glycine permease. | 0.719 |
dksA | kpsF | CF0796 | CF0788 | dnaK suppressor. | Sugar-phosphate isomerase-like protein; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.578 |
dksA | lspA | CF0796 | CF0797 | dnaK suppressor. | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.850 |
dksA | ribC | CF0796 | CF0794 | dnaK suppressor. | Riboflavin synthase alpha chain; EC 2.5.1.9. | 0.600 |
dksA | rrm10 | CF0796 | CF0792 | dnaK suppressor. | tRNA/rRNA methyltransferase; EC 2.1.1.-; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.602 |
dksA | rrm11 | CF0796 | CF0793 | dnaK suppressor. | tRNA/rRNA methyltransferase; EC 2.1.1.-. | 0.598 |
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