Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0457 | argF | APE_0457 | APE_1992.1 | class-III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.678 |
| APE_0457 | guaA | APE_0457 | APE_2452 | class-III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.553 |
| APE_0457 | lysJ | APE_0457 | APE_1464 | class-III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Acetyl-lysine aminotransferase/acetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily. | 0.441 |
| APE_0457 | lysK | APE_0457 | APE_1467.1 | class-III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Acetyl-lysine deacetylase/acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.560 |
| APE_0586.1 | lysK | APE_0586.1 | APE_1467.1 | Putative transketolase N-terminal section. | Acetyl-lysine deacetylase/acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.544 |
| APE_1917 | guaA | APE_1917 | APE_2452 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.558 |
| APE_1917 | lysK | APE_1917 | APE_1467.1 | Hypothetical protein. | Acetyl-lysine deacetylase/acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.554 |
| APE_1917 | lysY | APE_1917 | APE_1462 | Hypothetical protein. | N-acetyl-gamma-aminoadipyl-phosphate reductase/N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.613 |
| argF | APE_0457 | APE_1992.1 | APE_0457 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | class-III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.678 |
| argF | lysJ | APE_1992.1 | APE_1464 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetyl-lysine aminotransferase/acetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily. | 0.918 |
| argF | lysK | APE_1992.1 | APE_1467.1 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetyl-lysine deacetylase/acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.918 |
| argF | lysX | APE_1992.1 | APE_1463 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Lysine biosynthesis protein LysX/ribosomal protein S6 modification protein RimK; Alternative gene symbol: rimK. | 0.422 |
| argF | lysY | APE_1992.1 | APE_1462 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-aminoadipyl-phosphate reductase/N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.922 |
| argF | lysZ | APE_1992.1 | APE_1461.1 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylaminoadipate kinase/acetylglutamate kinase; Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis); Belongs to the acetylglutamate kinase family. LysZ subfamily. | 0.919 |
| guaA | APE_0457 | APE_2452 | APE_0457 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | class-III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.553 |
| guaA | APE_1917 | APE_2452 | APE_1917 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein. | 0.558 |
| guaA | lysJ | APE_2452 | APE_1464 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Acetyl-lysine aminotransferase/acetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily. | 0.716 |
| guaA | lysK | APE_2452 | APE_1467.1 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Acetyl-lysine deacetylase/acetylornithine deacetylase; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine and the release of L-ornithine from [LysW]-L-ornithine. | 0.558 |
| guaA | lysY | APE_2452 | APE_1462 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | N-acetyl-gamma-aminoadipyl-phosphate reductase/N-acetyl-gamma-glutamyl-phosphate reductase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. | 0.574 |
| guaA | lysZ | APE_2452 | APE_1461.1 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Acetylaminoadipate kinase/acetylglutamate kinase; Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis); Belongs to the acetylglutamate kinase family. LysZ subfamily. | 0.427 |
page 1 of 4