Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0254 | ubiX | APE_0254 | APE_1647 | Hypothetical protein. | Probable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.465 |
| APE_0603 | APE_1652 | APE_0603 | APE_1652 | Molybdopterin converting factor; MoaD-MoaE fusion protein. | PqqE homolog. | 0.526 |
| APE_0603 | APE_1655 | APE_0603 | APE_1655 | Molybdopterin converting factor; MoaD-MoaE fusion protein. | PqqE homolog. | 0.526 |
| APE_0603 | ubiX | APE_0603 | APE_1647 | Molybdopterin converting factor; MoaD-MoaE fusion protein. | Probable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.418 |
| APE_1648.1 | APE_1649.1 | APE_1648.1 | APE_1649.1 | Hypothetical protein. | Conserved hypothetical protein. | 0.740 |
| APE_1648.1 | APE_1652 | APE_1648.1 | APE_1652 | Hypothetical protein. | PqqE homolog. | 0.492 |
| APE_1648.1 | APE_1655 | APE_1648.1 | APE_1655 | Hypothetical protein. | PqqE homolog. | 0.492 |
| APE_1648.1 | ubiX | APE_1648.1 | APE_1647 | Hypothetical protein. | Probable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.784 |
| APE_1649.1 | APE_1648.1 | APE_1649.1 | APE_1648.1 | Conserved hypothetical protein. | Hypothetical protein. | 0.740 |
| APE_1649.1 | APE_1652 | APE_1649.1 | APE_1652 | Conserved hypothetical protein. | PqqE homolog. | 0.507 |
| APE_1649.1 | APE_1655 | APE_1649.1 | APE_1655 | Conserved hypothetical protein. | PqqE homolog. | 0.507 |
| APE_1649.1 | ubiX | APE_1649.1 | APE_1647 | Conserved hypothetical protein. | Probable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.737 |
| APE_1652 | APE_0603 | APE_1652 | APE_0603 | PqqE homolog. | Molybdopterin converting factor; MoaD-MoaE fusion protein. | 0.526 |
| APE_1652 | APE_1648.1 | APE_1652 | APE_1648.1 | PqqE homolog. | Hypothetical protein. | 0.492 |
| APE_1652 | APE_1649.1 | APE_1652 | APE_1649.1 | PqqE homolog. | Conserved hypothetical protein. | 0.507 |
| APE_1652 | APE_1655 | APE_1652 | APE_1655 | PqqE homolog. | PqqE homolog. | 0.981 |
| APE_1652 | ubiX | APE_1652 | APE_1647 | PqqE homolog. | Probable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.486 |
| APE_1655 | APE_0603 | APE_1655 | APE_0603 | PqqE homolog. | Molybdopterin converting factor; MoaD-MoaE fusion protein. | 0.526 |
| APE_1655 | APE_1648.1 | APE_1655 | APE_1648.1 | PqqE homolog. | Hypothetical protein. | 0.492 |
| APE_1655 | APE_1649.1 | APE_1655 | APE_1649.1 | PqqE homolog. | Conserved hypothetical protein. | 0.507 |
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