STRINGSTRING
APE_2580 APE_2580 APE_0688 APE_0688 APE_2579.1 APE_2579.1 APE_2578 APE_2578 APE_2581 APE_2581 APE_2361.1 APE_2361.1 cobS cobS dapA dapA valS valS APE_2350.1 APE_2350.1 ribB ribB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
APE_2580Putative flavoredoxin. (263 aa)    
Predicted Functional Partners:
APE_0688
Hypothetical protein.
  
  
 0.511
APE_2579.1
ABC transporter, ATP binding protein.
       0.511
APE_2578
ABC transporter, permease protein.
       0.510
APE_2581
Hypothetical protein.
       0.453
APE_2361.1
Putative hydrolase.
  
  
 0.440
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
     0.436
dapA
Putative dihydrodipicolinate synthase.
  
  
 0.432
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner (By similarity); Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily.
 
     0.422
APE_2350.1
Putative hydrolase.
  
  
 0.421
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase.
  
  
 0.417
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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