STRINGSTRING
CA_C0580 CA_C0580 prkA prkA spoVR spoVR CA_C2906 CA_C2906 CA_C2678 CA_C2678 ssb-2 ssb-2 CA_C0555 CA_C0555 CA_C2581 CA_C2581 CA_C2086 CA_C2086 CA_C2040 CA_C2040 CA_C2908 CA_C2908
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA_C0580Similar to yhbH B.subtilis; Belongs to the UPF0229 family. (391 aa)    
Predicted Functional Partners:
prkA
Serine protein kinase (prkA protein), P-loop containing.
 
  
 0.997
spoVR
Stage V sporulation protein R.
 
  
 0.995
CA_C2906
Spore coat protein cotS related.
  
  
 0.787
CA_C2678
Hypothetical protein.
   
    0.608
ssb-2
Single-strand DNA-binding protein, ssb.
   
    0.604
CA_C0555
Predicted membrane protein.
   
    0.602
CA_C2581
6-pyruvoyl-tetrahydropterin synthase related domain; conserved membrane protein.
   
    0.594
CA_C2086
Stage III sporulation protein AH, SpoIIIAH.
  
  
 0.586
CA_C2040
ABC transported MDR-type, ATPase component.
   
    0.580
CA_C2908
Spore coat protein cotS related.
  
  
 0.539
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.