Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PEPE_0444 | gpsA | PEPE_0444 | PEPE_0443 | UDP-glucose pyrophosphorylase. | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.792 |
PEPE_0444 | lgt | PEPE_0444 | PEPE_0442 | UDP-glucose pyrophosphorylase. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.617 |
PEPE_0602 | PEPE_1624 | PEPE_0602 | PEPE_1624 | Glycerol-3-phosphate cytidylyltransferase. | Glycerol 3-phosphate oxidase. | 0.903 |
PEPE_0602 | gpsA | PEPE_0602 | PEPE_0443 | Glycerol-3-phosphate cytidylyltransferase. | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.974 |
PEPE_0602 | plsY | PEPE_0602 | PEPE_0960 | Glycerol-3-phosphate cytidylyltransferase. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.900 |
PEPE_0873 | PEPE_1367 | PEPE_0873 | PEPE_1367 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Diacylglycerol kinase. | 0.925 |
PEPE_0873 | PEPE_1624 | PEPE_0873 | PEPE_1624 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycerol 3-phosphate oxidase. | 0.847 |
PEPE_0873 | gpsA | PEPE_0873 | PEPE_0443 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.883 |
PEPE_0873 | plsY | PEPE_0873 | PEPE_0960 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.944 |
PEPE_1367 | PEPE_0873 | PEPE_1367 | PEPE_0873 | Diacylglycerol kinase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.925 |
PEPE_1367 | PEPE_1624 | PEPE_1367 | PEPE_1624 | Diacylglycerol kinase. | Glycerol 3-phosphate oxidase. | 0.825 |
PEPE_1367 | gpsA | PEPE_1367 | PEPE_0443 | Diacylglycerol kinase. | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.804 |
PEPE_1624 | PEPE_0602 | PEPE_1624 | PEPE_0602 | Glycerol 3-phosphate oxidase. | Glycerol-3-phosphate cytidylyltransferase. | 0.903 |
PEPE_1624 | PEPE_0873 | PEPE_1624 | PEPE_0873 | Glycerol 3-phosphate oxidase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.847 |
PEPE_1624 | PEPE_1367 | PEPE_1624 | PEPE_1367 | Glycerol 3-phosphate oxidase. | Diacylglycerol kinase. | 0.825 |
PEPE_1624 | PEPE_1660 | PEPE_1624 | PEPE_1660 | Glycerol 3-phosphate oxidase. | Dihydroxyacetone kinase DhaM subunit. | 0.832 |
PEPE_1624 | PEPE_1661 | PEPE_1624 | PEPE_1661 | Glycerol 3-phosphate oxidase. | Dihydroxyacetone kinase DhaL subunit. | 0.837 |
PEPE_1624 | PEPE_1662 | PEPE_1624 | PEPE_1662 | Glycerol 3-phosphate oxidase. | Dihydroxyacetone kinase DhaK subunit. | 0.837 |
PEPE_1624 | gpsA | PEPE_1624 | PEPE_0443 | Glycerol 3-phosphate oxidase. | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.935 |
PEPE_1624 | plsY | PEPE_1624 | PEPE_0960 | Glycerol 3-phosphate oxidase. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.917 |
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