STRINGSTRING
tmcAL tmcAL PEPE_0709 PEPE_0709 PEPE_0707 PEPE_0707 rsfS rsfS nadD nadD PEPE_0705 PEPE_0705 PEPE_0704 PEPE_0704 PEPE_0703 PEPE_0703 PEPE_0711 PEPE_0711 polC polC PEPE_0874 PEPE_0874
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
tmcALPredicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (366 aa)    
Predicted Functional Partners:
PEPE_0709
SAM-dependent methyltransferase.
  
    0.933
PEPE_0707
NAD metabolism hydrolase of HD superfamily.
 
  
 0.886
rsfS
Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.836
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
    0.812
PEPE_0705
RNA-binding protein, KH domain.
  
    0.780
PEPE_0704
Predicted GTPase.
 
   
 0.770
PEPE_0703
Predicted hydrolase of the HAD superfamily.
     
 0.734
PEPE_0711
Predicted metal-binding, possibly nucleic acid-binding protein.
       0.708
polC
DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
    0.690
PEPE_0874
Predicted O-methyltransferase; Belongs to the methyltransferase superfamily.
 
     0.657
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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