node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PEPE_0888 | PEPE_0889 | PEPE_0888 | PEPE_0889 | Predicted nucleic-acid-binding protein implicated in transcription termination. | LSU ribosomal protein L7AE. | 0.979 |
PEPE_0888 | infB | PEPE_0888 | PEPE_0890 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.962 |
PEPE_0888 | nusA | PEPE_0888 | PEPE_0887 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Transcription elongation factor; Participates in both transcription termination and antitermination. | 0.966 |
PEPE_0888 | rbfA | PEPE_0888 | PEPE_0891 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.856 |
PEPE_0888 | rimP | PEPE_0888 | PEPE_0886 | Predicted nucleic-acid-binding protein implicated in transcription termination. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.954 |
PEPE_0888 | truB | PEPE_0888 | PEPE_0892 | Predicted nucleic-acid-binding protein implicated in transcription termination. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.682 |
PEPE_0889 | PEPE_0888 | PEPE_0889 | PEPE_0888 | LSU ribosomal protein L7AE. | Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.979 |
PEPE_0889 | infB | PEPE_0889 | PEPE_0890 | LSU ribosomal protein L7AE. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.995 |
PEPE_0889 | nusA | PEPE_0889 | PEPE_0887 | LSU ribosomal protein L7AE. | Transcription elongation factor; Participates in both transcription termination and antitermination. | 0.964 |
PEPE_0889 | rbfA | PEPE_0889 | PEPE_0891 | LSU ribosomal protein L7AE. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.792 |
PEPE_0889 | rimP | PEPE_0889 | PEPE_0886 | LSU ribosomal protein L7AE. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.957 |
PEPE_0889 | rpsD | PEPE_0889 | PEPE_1297 | LSU ribosomal protein L7AE. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
PEPE_0889 | rpsE | PEPE_0889 | PEPE_1401 | LSU ribosomal protein L7AE. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.996 |
PEPE_0889 | rpsO | PEPE_0889 | PEPE_1146 | LSU ribosomal protein L7AE. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.994 |
PEPE_0889 | rpsQ | PEPE_0889 | PEPE_1409 | LSU ribosomal protein L7AE. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.998 |
PEPE_0889 | truB | PEPE_0889 | PEPE_0892 | LSU ribosomal protein L7AE. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.995 |
infB | PEPE_0888 | PEPE_0890 | PEPE_0888 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Predicted nucleic-acid-binding protein implicated in transcription termination. | 0.962 |
infB | PEPE_0889 | PEPE_0890 | PEPE_0889 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | LSU ribosomal protein L7AE. | 0.995 |
infB | nusA | PEPE_0890 | PEPE_0887 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription elongation factor; Participates in both transcription termination and antitermination. | 0.985 |
infB | rbfA | PEPE_0890 | PEPE_0891 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.976 |