STRINGSTRING
asnA asnA PEPE_0659 PEPE_0659 purA purA pyrB pyrB PEPE_0301 PEPE_0301 PEPE_0662 PEPE_0662 PEPE_0137 PEPE_0137
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
asnAAspartate-ammonia ligase. (335 aa)    
Predicted Functional Partners:
PEPE_0659
Asparagine synthase (glutamine-hydrolyzing).
   
 
 0.923
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.903
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.902
PEPE_0301
Asparaginase.
    
 0.900
PEPE_0662
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
     
  0.900
PEPE_0137
Aspartate kinase; Belongs to the aspartokinase family.
     
  0.800
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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