STRINGSTRING
bshC bshC Paes_1530 Paes_1530 Paes_0690 Paes_0690 surE surE Paes_1840 Paes_1840 Paes_1940 Paes_1940 Paes_2021 Paes_2021 Paes_2291 Paes_2291
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bshCKEGG: cte:CT1558 hypothetical protein; Belongs to the BshC family. (563 aa)    
Predicted Functional Partners:
Paes_1530
PFAM: LmbE family protein; KEGG: cch:Cag_1596 hypothetical protein.
 
  
 0.906
Paes_0690
PFAM: glycosyl transferase group 1; KEGG: cph:Cpha266_0799 glycosyl transferase, group 1.
  
   
 0.795
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.788
Paes_1840
Patatin; PFAM: surface antigen (D15); Patatin; KEGG: pvi:Cvib_0421 surface antigen (D15).
 
     0.626
Paes_1940
KEGG: plt:Plut_0286 hypothetical protein.
  
     0.435
Paes_2021
KEGG: cph:Cpha266_2378 hypothetical protein.
  
     0.417
Paes_2291
PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: cph:Cpha266_2114 putative thiol-disulphide oxidoreductase DCC.
  
     0.403
Your Current Organism:
Prosthecochloris aestuarii
NCBI taxonomy Id: 290512
Other names: P. aestuarii DSM 271, Prosthecochloris aestuarii DSM 271, Prosthecochloris aestuarii SK 413, Prosthecochloris aestuarii SK413/DSMZ 271(t), Prosthecochloris aestuarii str. DSM 271, Prosthecochloris aestuarii strain DSM 271
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