Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GOX0473 | GOX0901 | GOX0473 | GOX0901 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Xanthine/uracil permease. | 0.794 |
GOX0473 | GOX1266 | GOX0473 | GOX1266 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Dihydroorotase. | 0.979 |
GOX0473 | GOX1965 | GOX0473 | GOX1965 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Dihydroorotase. | 0.980 |
GOX0473 | carA | GOX0473 | GOX0321 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.969 |
GOX0473 | carB | GOX0473 | GOX0322 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.975 |
GOX0473 | purA | GOX0473 | GOX1448 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.421 |
GOX0473 | pyrB | GOX0473 | GOX1267 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.973 |
GOX0473 | pyrE | GOX0473 | GOX1998 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.996 |
GOX0473 | pyrF | GOX0473 | GOX2235 | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.962 |
GOX0901 | GOX0473 | GOX0901 | GOX0473 | Xanthine/uracil permease. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.794 |
GOX0901 | GOX1266 | GOX0901 | GOX1266 | Xanthine/uracil permease. | Dihydroorotase. | 0.782 |
GOX0901 | GOX1965 | GOX0901 | GOX1965 | Xanthine/uracil permease. | Dihydroorotase. | 0.782 |
GOX0901 | carA | GOX0901 | GOX0321 | Xanthine/uracil permease. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.863 |
GOX0901 | carB | GOX0901 | GOX0322 | Xanthine/uracil permease. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.856 |
GOX0901 | pyrB | GOX0901 | GOX1267 | Xanthine/uracil permease. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.962 |
GOX0901 | pyrE | GOX0901 | GOX1998 | Xanthine/uracil permease. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.856 |
GOX0901 | pyrF | GOX0901 | GOX2235 | Xanthine/uracil permease. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.871 |
GOX1266 | GOX0473 | GOX1266 | GOX0473 | Dihydroorotase. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.979 |
GOX1266 | GOX0901 | GOX1266 | GOX0901 | Dihydroorotase. | Xanthine/uracil permease. | 0.782 |
GOX1266 | GOX1965 | GOX1266 | GOX1965 | Dihydroorotase. | Dihydroorotase. | 0.926 |
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