STRINGSTRING
RPC_2571 RPC_2571 RPC_1207 RPC_1207 RPC_2496 RPC_2496 RPC_0278 RPC_0278 lipA lipA RPC_2573 RPC_2573 RPC_2545 RPC_2545 RPC_0761 RPC_0761
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPC_2571DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. (224 aa)    
Predicted Functional Partners:
RPC_1207
Exodeoxyribonuclease III.
 
  
 0.703
RPC_2496
Exodeoxyribonuclease III.
 
  
 0.694
RPC_0278
Exodeoxyribonuclease III (xth).
    
 0.654
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
     
 0.641
RPC_2573
Cyclase/dehydrase.
       0.610
RPC_2545
Phosphoesterase, PA-phosphatase related.
  
  
 0.473
RPC_0761
Glutamate synthase (NADH) large subunit.
     
 0.440
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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