node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pden_0836 | serS | Pden_0836 | Pden_2429 | PFAM: beta-ketoacyl synthase; Thioesterase; acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; KR; KEGG: sil:SPO0849 non-ribosomal peptide synthase. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.781 |
Pden_0836 | thrS | Pden_0836 | Pden_0955 | PFAM: beta-ketoacyl synthase; Thioesterase; acyl transferase domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; KR; KEGG: sil:SPO0849 non-ribosomal peptide synthase. | Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr). | 0.466 |
argS | cysS | Pden_1870 | Pden_4063 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.568 |
argS | hisS | Pden_1870 | Pden_1925 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; KEGG: sil:SPO0667 histidyl-tRNA synthetase. | 0.714 |
argS | ileS | Pden_1870 | Pden_3612 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.972 |
argS | leuS | Pden_1870 | Pden_2765 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | TIGRFAM: leucyl-tRNA synthetase; KEGG: rsp:RSP_0840 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.897 |
argS | serS | Pden_1870 | Pden_2429 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.810 |
argS | thrS | Pden_1870 | Pden_0955 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr). | 0.667 |
argS | trpS | Pden_1870 | Pden_3953 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.726 |
argS | valS | Pden_1870 | Pden_2331 | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.826 |
cysS | argS | Pden_4063 | Pden_1870 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | 0.568 |
cysS | hisS | Pden_4063 | Pden_1925 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; KEGG: sil:SPO0667 histidyl-tRNA synthetase. | 0.747 |
cysS | ileS | Pden_4063 | Pden_3612 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. | 0.713 |
cysS | leuS | Pden_4063 | Pden_2765 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | TIGRFAM: leucyl-tRNA synthetase; KEGG: rsp:RSP_0840 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.797 |
cysS | serS | Pden_4063 | Pden_2429 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.809 |
cysS | thrS | Pden_4063 | Pden_0955 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr). | 0.889 |
cysS | trpS | Pden_4063 | Pden_3953 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.593 |
cysS | valS | Pden_4063 | Pden_2331 | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.831 |
hisS | argS | Pden_1925 | Pden_1870 | PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; KEGG: sil:SPO0667 histidyl-tRNA synthetase. | KEGG: rsp:RSP_2943 arginyl-tRNA synthetase, class I; TIGRFAM: arginyl-tRNA synthetase. | 0.714 |
hisS | cysS | Pden_1925 | Pden_4063 | PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; KEGG: sil:SPO0667 histidyl-tRNA synthetase. | KEGG: sit:TM1040_1153 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.747 |