STRINGSTRING
speA speA aguA aguA ABP74376.1 ABP74376.1 argH argH ABP75306.1 ABP75306.1 ABP75373.1 ABP75373.1 gpsA gpsA speE speE ABP74239.1 ABP74239.1 ABP74273.1 ABP74273.1 murA murA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
speAArginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (637 aa)    
Predicted Functional Partners:
aguA
PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: she:Shewmr4_3288 porphyromonas-type peptidyl-arginine deiminase.
 
  
 0.963
ABP74376.1
PFAM: arginine N-succinyltransferase beta subunit; KEGG: shm:Shewmr7_3418 arginine N-succinyltransferase.
     
  0.900
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: she:Shewmr4_3705 argininosuccinate lyase.
     
 0.840
ABP75306.1
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: shm:Shewmr7_2467 malonyl CoA-acyl carrier protein transacylase.
   
    0.687
ABP75373.1
PFAM: S-adenosylmethionine decarboxylase; KEGG: son:SO1871 S-adenosylmethionine decarboxylase proenzyme, putative.
     
 0.594
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: son:SO0053 glycerol-3-phosphate dehydrogenase (NAD(P)+).
   
    0.531
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
  0.499
ABP74239.1
PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: she:Shewmr4_3550 arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
  
  
 0.489
ABP74273.1
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: son:SO4136 decarboxylase, pyridoxal-dependent; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 0.489
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
    0.415
Your Current Organism:
Shewanella putrefaciens
NCBI taxonomy Id: 319224
Other names: S. putrefaciens CN-32, Shewanella putrefaciens CN-32, Shewanella putrefaciens str. CN-32, Shewanella putrefaciens strain CN-32
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