rpsG protein (Chlorobium phaeobacteroides BS1)

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rpsG

Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (155 aa)

Predicted Functional Partners:

rpsL

0.999

rpsD

0.998

rpsK

0.998

rpsH

0.998

rpsC

0.998

rpsS

0.998

rplD

0.998

rpsJ

0.998

rpsB

0.997

rpsI

0.997

Your Current Organism:

Chlorobium phaeobacteroides BS1

NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplD	rpsB	Cphamn1_2295	Cphamn1_2013	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rplD	rpsC	Cphamn1_2295	Cphamn1_2290	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplD	rpsD	Cphamn1_2295	Cphamn1_2270	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.997
rplD	rpsG	Cphamn1_2295	Cphamn1_2300	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.998
rplD	rpsH	Cphamn1_2295	Cphamn1_2282	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.997
rplD	rpsI	Cphamn1_2295	Cphamn1_2014	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	PFAM: ribosomal protein S9; KEGG: cch:Cag_1649 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.982
rplD	rpsJ	Cphamn1_2295	Cphamn1_2297	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplD	rpsK	Cphamn1_2295	Cphamn1_2271	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.997
rplD	rpsL	Cphamn1_2295	Cphamn1_2301	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.998
rplD	rpsS	Cphamn1_2295	Cphamn1_2292	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rpsB	rplD	Cphamn1_2013	Cphamn1_2295	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.997
rpsB	rpsC	Cphamn1_2013	Cphamn1_2290	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.997
rpsB	rpsD	Cphamn1_2013	Cphamn1_2270	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.998
rpsB	rpsG	Cphamn1_2013	Cphamn1_2300	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.997
rpsB	rpsH	Cphamn1_2013	Cphamn1_2282	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.997
rpsB	rpsI	Cphamn1_2013	Cphamn1_2014	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	PFAM: ribosomal protein S9; KEGG: cch:Cag_1649 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rpsB	rpsJ	Cphamn1_2013	Cphamn1_2297	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.996
rpsB	rpsK	Cphamn1_2013	Cphamn1_2271	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.997
rpsB	rpsL	Cphamn1_2013	Cphamn1_2301	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.997
rpsB	rpsS	Cphamn1_2013	Cphamn1_2292	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.997

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