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alr alr Sfum_3106 Sfum_3106 murF murF ddl ddl Sfum_0712 Sfum_0712 Sfum_0713 Sfum_0713 Sfum_3570 Sfum_3570 Sfum_2312 Sfum_2312 nadD nadD lgt lgt murD murD
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (375 aa)    
Predicted Functional Partners:
Sfum_3106
TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; alanine dehydrogenase/PNT domain protein; KEGG: sth:STH1822 alanine dehydrogenase; Belongs to the AlaDH/PNT family.
  
 
 0.982
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
   
 0.962
ddl
D-alanine--D-alanine ligase; Cell wall formation.
 
 
 0.954
Sfum_0712
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.922
Sfum_0713
PFAM: protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; KEGG: dde:Dde_3043 D-alanine-D-alanine ligase and related ATP-grasp enzymes-like.
  
 
 0.922
Sfum_3570
PFAM: aminotransferase, class I and II; KEGG: pca:Pcar_0011 hypothetical protein.
    
 0.829
Sfum_2312
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bbr:BB1116 nitrilase.
  
 
 0.816
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
  
 0.815
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
  
 0.719
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
 
 
 0.684
Your Current Organism:
Syntrophobacter fumaroxidans
NCBI taxonomy Id: 335543
Other names: S. fumaroxidans MPOB, Syntrophobacter fumaroxidans DSM 10017, Syntrophobacter fumaroxidans MPOB, Syntrophobacter fumaroxidans str. MPOB, Syntrophobacter fumaroxidans strain MPOB, Syntrophobacter sp. DSM 10017, syntrophic propionate-oxidizing bacterium DSM 10017
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