node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sfum_0150 | Sfum_1813 | Sfum_0150 | Sfum_1813 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.661 |
Sfum_0150 | glnS | Sfum_0150 | Sfum_3516 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pca:Pcar_0101 glutaminyl-tRNA synthetase. | 0.552 |
Sfum_0150 | rimO | Sfum_0150 | Sfum_1585 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.630 |
Sfum_0150 | rlmN | Sfum_0150 | Sfum_4057 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Radical SAM domain protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.964 |
Sfum_0536 | Sfum_0598 | Sfum_0536 | Sfum_0598 | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: sat:SYN_01527 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: gsu:GSU1267 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | 0.924 |
Sfum_0536 | glnS | Sfum_0536 | Sfum_3516 | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: sat:SYN_01527 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pca:Pcar_0101 glutaminyl-tRNA synthetase. | 0.631 |
Sfum_0536 | prfA | Sfum_0536 | Sfum_1713 | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: sat:SYN_01527 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.445 |
Sfum_0536 | rimO | Sfum_0536 | Sfum_1585 | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: sat:SYN_01527 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.692 |
Sfum_0598 | Sfum_0536 | Sfum_0598 | Sfum_0536 | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: gsu:GSU1267 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: sat:SYN_01527 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | 0.924 |
Sfum_0598 | glnS | Sfum_0598 | Sfum_3516 | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: gsu:GSU1267 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pca:Pcar_0101 glutaminyl-tRNA synthetase. | 0.501 |
Sfum_0598 | rimO | Sfum_0598 | Sfum_1585 | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: gsu:GSU1267 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.676 |
Sfum_1360 | rimO | Sfum_1360 | Sfum_1585 | Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.489 |
Sfum_1360 | rlmN | Sfum_1360 | Sfum_4057 | Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Radical SAM domain protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.633 |
Sfum_1586 | rimO | Sfum_1586 | Sfum_1585 | Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; KEGG: gsu:GSU1317 octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.550 |
Sfum_1813 | Sfum_0150 | Sfum_1813 | Sfum_0150 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.661 |
Sfum_1813 | glnS | Sfum_1813 | Sfum_3516 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pca:Pcar_0101 glutaminyl-tRNA synthetase. | 0.576 |
Sfum_1813 | rimO | Sfum_1813 | Sfum_1585 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.551 |
glnS | Sfum_0150 | Sfum_3516 | Sfum_0150 | TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pca:Pcar_0101 glutaminyl-tRNA synthetase. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.552 |
glnS | Sfum_0536 | Sfum_3516 | Sfum_0536 | TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pca:Pcar_0101 glutaminyl-tRNA synthetase. | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: sat:SYN_01527 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | 0.631 |
glnS | Sfum_0598 | Sfum_3516 | Sfum_0598 | TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pca:Pcar_0101 glutaminyl-tRNA synthetase. | Signal peptidase I. Serine peptidase. MEROPS family S26A; KEGG: gsu:GSU1267 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; Belongs to the peptidase S26 family. | 0.501 |