Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rfer_0832 | Rfer_3235 | Rfer_0832 | Rfer_3235 | Heat shock protein 70. | AAA ATPase. | 0.810 |
| Rfer_0832 | Rfer_3493 | Rfer_0832 | Rfer_3493 | Heat shock protein 70. | ABC transporter related. | 0.404 |
| Rfer_0832 | dnaK | Rfer_0832 | Rfer_1969 | Heat shock protein 70. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.907 |
| Rfer_0832 | msbA | Rfer_0832 | Rfer_2090 | Heat shock protein 70. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.699 |
| Rfer_1094 | Rfer_1103 | Rfer_1094 | Rfer_1103 | ABC transporter related; Belongs to the ABC transporter superfamily. | ABC transporter related; Belongs to the ABC transporter superfamily. | 0.505 |
| Rfer_1094 | Rfer_3493 | Rfer_1094 | Rfer_3493 | ABC transporter related; Belongs to the ABC transporter superfamily. | ABC transporter related. | 0.506 |
| Rfer_1094 | msbA | Rfer_1094 | Rfer_2090 | ABC transporter related; Belongs to the ABC transporter superfamily. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.720 |
| Rfer_1103 | Rfer_1094 | Rfer_1103 | Rfer_1094 | ABC transporter related; Belongs to the ABC transporter superfamily. | ABC transporter related; Belongs to the ABC transporter superfamily. | 0.505 |
| Rfer_1103 | msbA | Rfer_1103 | Rfer_2090 | ABC transporter related; Belongs to the ABC transporter superfamily. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.730 |
| Rfer_1521 | msbA | Rfer_1521 | Rfer_2090 | ABC transporter related. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.717 |
| Rfer_2091 | msbA | Rfer_2091 | Rfer_2090 | Glycosyl transferase, family 2. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.833 |
| Rfer_2091 | tolB | Rfer_2091 | Rfer_2092 | Glycosyl transferase, family 2. | TolB-like; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.550 |
| Rfer_2722 | msbA | Rfer_2722 | Rfer_2090 | ABC transporter related. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.690 |
| Rfer_3235 | Rfer_0832 | Rfer_3235 | Rfer_0832 | AAA ATPase. | Heat shock protein 70. | 0.810 |
| Rfer_3235 | dnaK | Rfer_3235 | Rfer_1969 | AAA ATPase. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.810 |
| Rfer_3235 | msbA | Rfer_3235 | Rfer_2090 | AAA ATPase. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.831 |
| Rfer_3493 | Rfer_0832 | Rfer_3493 | Rfer_0832 | ABC transporter related. | Heat shock protein 70. | 0.404 |
| Rfer_3493 | Rfer_1094 | Rfer_3493 | Rfer_1094 | ABC transporter related. | ABC transporter related; Belongs to the ABC transporter superfamily. | 0.506 |
| Rfer_3493 | dnaK | Rfer_3493 | Rfer_1969 | ABC transporter related. | Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.466 |
| Rfer_3493 | msbA | Rfer_3493 | Rfer_2090 | ABC transporter related. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.713 |
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