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cmoA cmoA cmoB cmoB ribF ribF ligA ligA tlyA tlyA lysC lysC EAT98741.1 EAT98741.1 rppH rppH hobA hobA holB holB folP folP
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
cmoAcarboxy-S-adenosyl-L-methionine synthase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). (234 aa)    
Predicted Functional Partners:
cmoB
tRNA (cmo5U34)-carboxymethyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.
 
 
 0.854
ribF
Bifunctional riboflavin kinase / FMN adenylyltransferase; Bifunctional; Pfam matches to PF01687.12 Flavokinase, and to PF06574.7 FAD_syn, and to PF06574.7 FAD_syn; Belongs to the ribF family.
     
 0.803
ligA
DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.800
tlyA
16S/23S rRNA (cytidine-2'-O)-methyltransferase; Bifunctional; Pfam matches to PF01728.14 FtsJ, and to PF01479.20 S4, and to PF08241.7 Methyltransf_11.
       0.800
lysC
Aspartokinase, alpha and beta subunits; Pfam matches to PF00696.23 AA_kinase, and to PF13840.1 ACT_7, and to PF01842.20 ACT, and to PF01842.20 ACT; Belongs to the aspartokinase family.
  
  
 0.644
EAT98741.1
Putative protein (DUF1768 domain); Pfam match to PF08719.6 DUF1768.
       0.642
rppH
RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family.
       0.638
hobA
DnaA-binding chromosome replication initiation factor; Pfam match to PF12163.3 HobA.
       0.638
holB
DNA polymerase III, delta prime subunit; Pfam match to PF13177.1 DNA_pol3_delta2.
       0.638
folP
Dihydropteroate synthase; Pfam match to PF00809.17 Pterin_bind.
       0.638
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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