STRINGSTRING
serS serS lolA lolA crcB crcB ACR13995.1 ACR13995.1 valS valS ACR13997.1 ACR13997.1 ACR12418.1 ACR12418.1 ACR13065.1 ACR13065.1 ACR10693.1 ACR10693.1 ACR12072.1 ACR12072.1 ACR11427.1 ACR11427.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
serSserine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (426 aa)    
Predicted Functional Partners:
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
    0.846
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.814
ACR13995.1
ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728.
       0.809
valS
valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
  
 0.807
ACR13997.1
Modular polyketide synthase, type I PKS; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801; match to protein family HMM PF08659; match to protein family HMM TIGR01681; match to protein family HMM TIGR01686.
   
 
 0.806
ACR12418.1
Modular polyketide synthase, type I PKS; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF08659.
   
 
 0.806
ACR13065.1
Modular polyketide synthase, type I PKS; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00975; match to protein family HMM PF02801; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM PF08659.
   
 
 0.805
ACR10693.1
DNA translocase ftsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397.
       0.800
ACR12072.1
Modular polyketide synthase, type I PKS; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF02801; match to protein family HMM PF08659.
   
 
 0.787
ACR11427.1
Modular polyketide synthase, type I PKS; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF08659.
   
 
 0.787
Your Current Organism:
Teredinibacter turnerae T7901
NCBI taxonomy Id: 377629
Other names: T. turnerae T7901, Teredinibacter turnerae str. T7901, Teredinibacter turnerae strain T7901
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