Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHA_3168 | codA | AHA_3168 | AHA_0082 | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.903 |
| AHA_3168 | deoA | AHA_3168 | AHA_3689 | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.985 |
| AHA_3168 | deoD-1 | AHA_3168 | AHA_3010 | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.932 |
| AHA_3168 | surE | AHA_3168 | AHA_0826 | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.902 |
| AHA_3168 | udk | AHA_3168 | AHA_2235 | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | Uridine kinase; Identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235. | 0.917 |
| AHA_3168 | udp | AHA_3168 | AHA_1464 | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.917 |
| AHA_3168 | upp | AHA_3168 | AHA_2820 | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.914 |
| codA | AHA_3168 | AHA_0082 | AHA_3168 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | 0.903 |
| codA | deoA | AHA_0082 | AHA_3689 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.920 |
| codA | deoD-1 | AHA_0082 | AHA_3010 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.900 |
| codA | udp | AHA_0082 | AHA_1464 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.903 |
| codA | upp | AHA_0082 | AHA_2820 | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.945 |
| deoA | AHA_3168 | AHA_3689 | AHA_3168 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | 0.985 |
| deoA | codA | AHA_3689 | AHA_0082 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Cytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.920 |
| deoA | deoD-1 | AHA_3689 | AHA_3010 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | 0.404 |
| deoA | guaA | AHA_3689 | AHA_1990 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.470 |
| deoA | surE | AHA_3689 | AHA_0826 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.931 |
| deoA | udp | AHA_3689 | AHA_1464 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.985 |
| deoA | upp | AHA_3689 | AHA_2820 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.960 |
| deoD-1 | AHA_3168 | AHA_3010 | AHA_3168 | Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107. | Uridine phosphorylase; Identified by match to protein family HMM PF01048. | 0.932 |
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