STRINGSTRING
dapAL dapAL Pisl_0272 Pisl_0272 Pisl_0271 Pisl_0271 rps17e rps17e rps15 rps15 taw3 taw3 Pisl_0441 Pisl_0441 cmk cmk rpl14e rpl14e fusA fusA Pisl_0273 Pisl_0273
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
dapALPFAM: dihydrodipicolinate synthetase; KEGG: pai:PAE2915 dihydrodipicolinate synthase; Belongs to the DapA family. (303 aa)    
Predicted Functional Partners:
Pisl_0272
KEGG: pai:PAE2876 aspartate-semialdehyde dehydrogenase (asd); TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region.
 
 
 0.981
Pisl_0271
PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; KEGG: pai:PAE2868 homoserine dehydrogenase.
  
 
 0.949
rps17e
KEGG: pai:PAE0804 ribosomal protein S17; Belongs to the eukaryotic ribosomal protein eS17 family.
  
    0.891
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: pai:PAE3485 ribosomal protein S13.
  
    0.834
taw3
Protein of unknown function DUF207; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family.
 
     0.824
Pisl_0441
PFAM: DNA-binding TFAR19-related protein; KEGG: pai:PAE3044 conserved hypothetical protein; Belongs to the PDCD5 family.
 
    0.816
cmk
TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk).
  
    0.803
rpl14e
KEGG: pai:PAE0862 ribosomal protein L14; Belongs to the eukaryotic ribosomal protein eL14 family.
  
    0.795
fusA
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
  
  
 0.781
Pisl_0273
PFAM: aspartate/glutamate/uridylate kinase; KEGG: pai:PAE2877 aspartate kinase.
 
  
 0.776
Your Current Organism:
Pyrobaculum islandicum
NCBI taxonomy Id: 384616
Other names: P. islandicum DSM 4184, Pyrobaculum islandicum DSM 4184, Pyrobaculum islandicum str. DSM 4184, Pyrobaculum islandicum strain DSM 4184
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