STRINGSTRING
lwe0147 lwe0147 lwe0146 lwe0146 rsmI rsmI lwe0145 lwe0145 lwe0144 lwe0144 lwe0143 lwe0143
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lwe0147GIY-YIG domain protein; Belongs to the UPF0213 family. (90 aa)    
Predicted Functional Partners:
lwe0146
Methyltransferase small domain protein.
  
  
 0.907
rsmI
Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.900
lwe0145
Conserved hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
    0.703
lwe0144
Conserved hypothetical protein.
  
    0.684
lwe0143
DNA polymerase III delta subunit domain protein.
  
    0.681
Your Current Organism:
Listeria welshimeri
NCBI taxonomy Id: 386043
Other names: L. welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b str. SLCC5334, Listeria welshimeri serovar 6b strain SLCC5334
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