Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cinA | lwe0076 | lwe1413 | lwe0076 | Competence/damage-inducible protein; Belongs to the CinA family. | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | 0.662 |
| cinA | lwe0112 | lwe1413 | lwe0112 | Competence/damage-inducible protein; Belongs to the CinA family. | Putative 5'-nucleotidase, peptidoglycan bound protein (LPXTG motif). | 0.917 |
| cinA | lwe0283 | lwe1413 | lwe0283 | Competence/damage-inducible protein; Belongs to the CinA family. | 5'-nucleotidase, putative. | 0.900 |
| cinA | lwe1411 | lwe1413 | lwe1411 | Competence/damage-inducible protein; Belongs to the CinA family. | Conserved DNA-binding domain protein. | 0.727 |
| cinA | lwe1495 | lwe1413 | lwe1495 | Competence/damage-inducible protein; Belongs to the CinA family. | comEC/Rec2 family protein. | 0.751 |
| cinA | nadD | lwe1413 | lwe1501 | Competence/damage-inducible protein; Belongs to the CinA family. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.966 |
| cinA | pgsA | lwe1413 | lwe1412 | Competence/damage-inducible protein; Belongs to the CinA family. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.981 |
| cinA | pncB | lwe1413 | lwe1067 | Competence/damage-inducible protein; Belongs to the CinA family. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.954 |
| cinA | recA | lwe1413 | lwe1414 | Competence/damage-inducible protein; Belongs to the CinA family. | RecA protein (Recombinase A); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.801 |
| cinA | recN | lwe1413 | lwe1383 | Competence/damage-inducible protein; Belongs to the CinA family. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.650 |
| lwe0076 | cinA | lwe0076 | lwe1413 | D-isomer specific 2-hydroxyacid dehydrogenase family protein. | Competence/damage-inducible protein; Belongs to the CinA family. | 0.662 |
| lwe0112 | cinA | lwe0112 | lwe1413 | Putative 5'-nucleotidase, peptidoglycan bound protein (LPXTG motif). | Competence/damage-inducible protein; Belongs to the CinA family. | 0.917 |
| lwe0112 | lwe0283 | lwe0112 | lwe0283 | Putative 5'-nucleotidase, peptidoglycan bound protein (LPXTG motif). | 5'-nucleotidase, putative. | 0.900 |
| lwe0112 | nadD | lwe0112 | lwe1501 | Putative 5'-nucleotidase, peptidoglycan bound protein (LPXTG motif). | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
| lwe0112 | pncB | lwe0112 | lwe1067 | Putative 5'-nucleotidase, peptidoglycan bound protein (LPXTG motif). | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.908 |
| lwe0283 | cinA | lwe0283 | lwe1413 | 5'-nucleotidase, putative. | Competence/damage-inducible protein; Belongs to the CinA family. | 0.900 |
| lwe0283 | lwe0112 | lwe0283 | lwe0112 | 5'-nucleotidase, putative. | Putative 5'-nucleotidase, peptidoglycan bound protein (LPXTG motif). | 0.900 |
| lwe0283 | nadD | lwe0283 | lwe1501 | 5'-nucleotidase, putative. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
| lwe0283 | pncB | lwe0283 | lwe1067 | 5'-nucleotidase, putative. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.900 |
| lwe1411 | cinA | lwe1411 | lwe1413 | Conserved DNA-binding domain protein. | Competence/damage-inducible protein; Belongs to the CinA family. | 0.727 |
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